DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc2 and tbxtb

DIOPT Version :9

Sequence 1:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_001343633.3 Gene:tbxtb / 100004296 ZFINID:ZDB-GENE-081028-48 Length:424 Species:Danio rerio


Alignment Length:370 Identity:126/370 - (34%)
Similarity:182/370 - (49%) Gaps:93/370 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSG 120
            :::.|..::||::|..:..|||:||:||||||.:::::|||:..:.|..||:.||..:.|:|:..
Zfish    40 LKVALDENELWQKFKALTNEMIVTKNGRRMFPVLKVNISGLDPNAMYSFLLDFVPADNHRWKYVN 104

  Fly   121 SQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRL 185
            .:|||.|..|||:|..:|:|||||..||||....:.|:||||||. |:..|.|:|.|:|||:||:
Zfish   105 GEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKSCVSFSKVKLTNK-LNGGGQIMLNSLHKYEPRI 168

  Fly   186 HVIRTADLAQIPWAPQQ---AFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRK 247
            |::|..       .||:   ...|.||:|:|||||||:.||.|||..|||||.|.:|.:....::
Zfish   169 HIVRVG-------GPQRMITTHAFPETQFIAVTAYQNEEITSLKIKYNPFAKAFLDTKERSDHKE 226

  Fly   248 M-----SSSPTGEDQDQS----------PSLS-HSQSQSESDMSPTKG----------------- 279
            :     .|..:|..|..|          ||.: |:|..|...:|.:.|                 
Zfish   227 IIEDVSESQQSGYSQLSSWFLPSAGSLCPSANPHAQLNSALSLSTSHGCERYSTLRGHRSAPYPS 291

  Fly   280 --GGETAGGT--------------------------SSI---GDSDGP-----QIKRLRSNGSAC 308
              ...||..|                          ||:   |.|.||     |...|.|.|::.
Zfish   292 TYAHRTASPTGYSDSSSCLSMLPSHDNWSSLQMSSHSSVLPMGHSSGPNSNTSQYTSLWSVGNSS 356

  Fly   309 ---SLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHPLQARSASS 350
               |:||||..|.:.|::.          |..|..|||.|.|:.|
Zfish   357 QSGSMSSSLGSQFLRGSAG----------HYSSLAHPLTAPSSGS 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc2NP_648282.1 TBOX 55..242 CDD:238106 87/188 (46%)
tbxtbXP_001343633.3 TBOX 40..221 CDD:238106 87/188 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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