DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc3 and TBX18

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001073977.1 Gene:TBX18 / 9096 HGNCID:11595 Length:607 Species:Homo sapiens


Alignment Length:447 Identity:155/447 - (34%)
Similarity:210/447 - (46%) Gaps:84/447 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PPPPPPQPTLPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLE 110
            |..|.|.|..|   ...|:..|||::||.|||||||||.||||||:|||.:|||:....|.:.::
Human   129 PGTPLPSPQAP---RVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLDPHQQYYIAMD 190

  Fly   111 MVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNN 173
            :||:.:.||:  :..|:|:.||.|:...|.|:|:||:|||:|:.|..|.:.|.|:|||||.||:.
Human   191 IVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLTNNELDDQ 255

  Fly   174 GHIVLASMHKYQPRLHVIRT---SDLGQIPWAPQ----QAFIFPETEFIAVTAYQNDRITKLKID 231
            |||:|.||||||||:||||.   .||..|...|.    :||.||||.|..||||||.:||:||||
Human   256 GHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTTVTAYQNQQITRLKID 320

  Fly   232 NNPFAKGFRESGQSR---------------CKRKINDSPPPTQPEANQVDRSPVTSPLAKRLRLV 281
            .||||||||:||::|               ..|.:.....|..|:......|.:.......:   
Human   321 RNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDIPGIPKQGNASSSTLLQGTGNGV--- 382

  Fly   282 EEFPQHHHH---------QSHHSVPMQRHYLLDALEANFYVPAPPPPAI-EYARHIGGAY----- 331
               |..|.|         .:.|..| ....|.....|::...|.....: .|:..:...|     
Human   383 ---PATHPHLLSGSSCSSPAFHLGP-NTSQLCSLAPADYSACARSGLTLNRYSTSLAETYNRLTN 443

  Fly   332 -PSWAYTPPSPASSVSSSSAGSTSGESAADREADADADTF--------VDVVGTAPAAP-PPPSP 386
             ....:.||...|.|..||:.|.:.....     .|.|||        :.:.|.:|... ..|||
Human   444 QAGETFAPPRTPSYVGVSSSTSVNMSMGG-----TDGDTFSCPQTSLSMQISGMSPQLQYIMPSP 503

  Fly   387 PVPATAT--------------APAS------SSSDPTMAKPKRSSFSISDILGTSSS 423
            ...|.||              :|.:      |:|....|.|::...|....||:|.|
Human   504 SSNAFATNQTHQGSYNTFRLHSPCALYGYNFSTSPKLAASPEKIVSSQGSFLGSSPS 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 106/195 (54%)
TBX18NP_001073977.1 Engrailed homology 1 repressor. /evidence=ECO:0000305 18..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..141 5/14 (36%)
Nuclear localization signal. /evidence=ECO:0000305 36..40
TBOX 139..334 CDD:238106 107/197 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.910

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