DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and eomesb

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001077044.1 Gene:eomesb / 799447 ZFINID:ZDB-GENE-070318-1 Length:534 Species:Danio rerio


Alignment Length:376 Identity:132/376 - (35%)
Similarity:181/376 - (48%) Gaps:73/376 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 NNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPA 129
            |..||.:||...|||||||.||||||.:..:::||...|.|.|.:|:|......::|.|.:||..
Zfish   145 NRPLWLKFHRHQTEMIITKQGRRMFPFLSFNMTGLSLSAHYNVFVEIVLADPNHWRFQGGKWVTC 209

  Fly   130 GGAE-PQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNN---TLDNNGHIVLASMHKYQPRLHV 190
            |.|: .....::|:|||||.||.||..|.:.|.|:|||||   .::.:..|||.|:||||||||:
Zfish   210 GKADNNMQGNKIYMHPESPNTGAHWMRQEISFGKLKLTNNKGANINTSQMIVLQSLHKYQPRLHI 274

  Fly   191 IRTSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKINDSP 255
            :..||......:..|.|.|||.:|||||||||..||:||||:||||||||::..|..        
Zfish   275 VEVSDDRSERDSNTQIFSFPENQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDSMY-------- 331

  Fly   256 PPTQPEANQVDRSPVTSPLAKRL-----RLVEEFPQHHHHQ-SHHSV--------PMQRHYLL-- 304
              |.|:..::..||..||.|:::     ..|:.|.|..... :..||        |.|| :|:  
Zfish   332 --TLPDRERLTPSPADSPRAQQMVPNARYAVQPFLQEQFSSLTQRSVTQPSSVEDPAQR-WLISQ 393

  Fly   305 --DALEANFYVPAPPPPAIEYARHIGGAYPSWAYTPPSPASSVSSSSAGST------SGESAADR 361
              ..||...|........:.|:..   :.|..:|.|.:..|..:..||||:      ||      
Zfish   394 NSSKLELTAYEGEYSSSLLPYSFK---SLPLQSYYPDTAFSWGTRVSAGSSFPRKLPSG------ 449

  Fly   362 EADADADTFVDVVGTAPAAPPPPSPPVPATATAPASSSSDPTMAKPKRSSF 412
                           .|.:|.|          :|...|.||..|:.:.|.|
Zfish   450 ---------------LPWSPRP----------SPTDFSEDPEKAREENSPF 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 91/183 (50%)
eomesbNP_001077044.1 TBOX 139..329 CDD:238106 91/183 (50%)
T-box_assoc 351..532 CDD:292794 33/160 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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