DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc3 and TBX2

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_005985.3 Gene:TBX2 / 6909 HGNCID:11597 Length:712 Species:Homo sapiens


Alignment Length:405 Identity:153/405 - (37%)
Similarity:217/405 - (53%) Gaps:78/405 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LPDP-LCGLLPNFAG---------HF--MPPPPP-----------PQPTLPGDVEAKLENNELWQ 70
            |||| |.|.....|.         |.  :.|.||           |:..:..|.:..||..|||.
Human    52 LPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWD 116

  Fly    71 QFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQ 135
            |||.:||||:|||.||||||..:|.:|||:::|.|.:|:::|...||||||..|:|:.||.|:|:
Human   117 QFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPE 181

  Fly   136 SPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHKYQPRLHVIRTSDLGQIP 200
            .|:|||:||:|||||:.|.::.:.|.|:|||||..|.:|..:|.||||||||.|::|.:|:.::|
Human   182 MPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLP 246

  Fly   201 WAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKINDSPPPTQPEANQV 265
            ::..:.::||||:||||||||||:||:|||||||||||||::|..|.::                
Human   247 YSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREK---------------- 295

  Fly   266 DRSPVTSPLAKRLRLVEEFPQHHHHQSHHSVPMQRHYLLDALEANFYVPAPPPPAIEYARHIGGA 330
             |..:|.|   .|||.||          |..|.:.....||...:      ||||.|        
Human   296 -RKQLTLP---SLRLYEE----------HCKPERDGAESDASSCD------PPPARE-------- 332

  Fly   331 YPSWAYTPPSPASSVSSSSAGSTSGESAADREADADADTFVDVVGTAPAAPPPPSPPVPATATAP 395
                  .|.||.::.|.........|   ::...||:|...:.:....|..|....|.|.:|:  
Human   333 ------PPTSPGAAPSPLRLHRARAE---EKSCAADSDPEPERLSEERAGAPLGRSPAPDSAS-- 386

  Fly   396 ASSSSDPTMAKPKRS 410
            .:..::|..|:.:||
Human   387 PTRLTEPERARERRS 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 106/186 (57%)
TBX2NP_005985.3 T-box_TBX2_3-like 103..287 CDD:410314 104/183 (57%)
PHA03307 300..>467 CDD:223039 33/140 (24%)
TBX 305..383 CDD:403708 24/110 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..450 25/114 (22%)
Repression domain 1 (RD1) 518..601
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 637..687
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.