DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and eomesa

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_571754.3 Gene:eomesa / 64603 ZFINID:ZDB-GENE-001228-1 Length:661 Species:Danio rerio


Alignment Length:480 Identity:152/480 - (31%)
Similarity:208/480 - (43%) Gaps:122/480 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LCGLLPNFAGHFM---------PPPPPPQPTL-----PGD-----VEAKLENNELWQQFHSIGTE 78
            :|.....|.|.:.         |..|.|..:|     ||.     .:..|.|..||.:||...||
Zfish   165 VCASRSQFGGGYQFGQGPGCLYPSYPGPGSSLSSMPIPGSGSAARAQVYLCNRPLWLKFHRHQTE 229

  Fly    79 MIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAE-PQSPQRMYL 142
            |||||.||||||.:..:::||...|.|.|.:|:|......::|.|.:||..|.|: .....::|:
Zfish   230 MIITKQGRRMFPFLSFNITGLNLTAHYNVFVEIVLADPNHWRFQGGKWVTCGKADNNMQGNKVYV 294

  Fly   143 HPESPATGKHWQSQALLFSKVKLTNNTLDNNGH---IVLASMHKYQPRLHVIRTSDLG---QIPW 201
            |||||.||.||..|.:.|.|:|||||...||.:   |||.|:||||||||::..::.|   ....
Zfish   295 HPESPNTGAHWMRQEISFGKLKLTNNKGANNNNTQMIVLQSLHKYQPRLHIVEVTEDGVEDMSSE 359

  Fly   202 APQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKINDSPPPTQPEANQVD 266
            |..|.|.|||.:|||||||||..||:||||:||||||||::..|..          |.||::::.
Zfish   360 AKTQTFTFPENQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDSMY----------TAPESDRLT 414

  Fly   267 RSPVTSPLAKRL--------------RLVEEFPQHHH-HQSHHSVPM------------------ 298
            .||..||.:.::              :.|...||:|. :.|..:||.                  
Zfish   415 PSPTDSPRSHQIVPGARYAMQPFFQDQFVNNLPQNHRFYGSERAVPQTNGLLSPQSEDSAAGSAS 479

  Fly   299 -QRHYL-----------LD-----ALEANFYVPAPPPPAIEYARHIGGAYPSWAYTPPSPASSVS 346
             ||.::           ||     ...|:..:|....|....:.|..|.||..|:          
Zfish   480 AQRWFVGPVQQSGATTKLDLSYDSEYSASSLLPYGIKPLPLQSPHALGYYPDSAF---------- 534

  Fly   347 SSSAGSTSGESAADREADADADTFVDVVGTAPAAPPPPSPPV--------------PATATAPAS 397
            :|.|...|..|:..|:           :.|.....|.||||.              ..:..||.:
Zfish   535 ASMAAGWSSRSSYQRK-----------MTTGLPWSPRPSPPAYTDDLLSSKDKLQDENSTAAPTA 588

  Fly   398 SSSDPTM-AKPKRSSFSISDILGTS 421
            :|:.|.| |.|...|....|..|.|
Zfish   589 ASTGPWMEAPPVLKSVDSGDTSGYS 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 94/198 (47%)
eomesaNP_571754.3 TBOX 210..403 CDD:238106 94/192 (49%)
T-box_assoc 425..659 CDD:292794 41/210 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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