DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx20

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001030292.1 Gene:tbx20 / 619590 XenbaseID:XB-GENE-487334 Length:440 Species:Xenopus tropicalis


Alignment Length:400 Identity:148/400 - (37%)
Similarity:205/400 - (51%) Gaps:91/400 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PDPLCGLLPNFAGHFMPPPPPPQPTLPGDVEAK----LENNELWQQFHSIGTEMIITKCGRRMFP 90
            |..||          ..|..|..|.:|.:..||    ||..|||.:||.:||||||||.||||||
 Frog    71 PSSLC----------TEPLIPTTPVIPSEEMAKISCSLETKELWDKFHDLGTEMIITKSGRRMFP 125

  Fly    91 SMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS--GSQWVPAGGAEPQSPQRMYLHPESPATGKHW 153
            ::|||.||::.:|.|.||:::||:.:.||:::  .|.|:.||.|:|..|.|:|:||:||.||:..
 Frog   126 TIRVSFSGVDADAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQL 190

  Fly   154 QSQALLFSKVKLTNNTLDNNGHIVLASMHKYQPRLHVIR----TSDLGQIPWAPQQAFIFPETEF 214
            ..|.:.|.|||||||.||.:|||:|.||||||||:|:|:    |:.|..:.....:.|||.||.|
 Frog   191 LKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFQETVF 255

  Fly   215 IAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKINDSPPPTQPEANQVDRSPVTSPLAKRLR 279
            .|||||||..|||||||:||||||||:|.      ::.|           ::|..|.|.:.|   
 Frog   256 TAVTAYQNQLITKLKIDSNPFAKGFRDSS------RLTD-----------IERESVESLIQK--- 300

  Fly   280 LVEEFPQHHHHQSHHSVPMQRHYLLDALEANFYVPAPPPPAIEYARHIGGAYPSWAYTPPSPASS 344
                   |.:.:|    |::.:...|.|..:.          :..:..|.|:        :.:.:
 Frog   301 -------HSYARS----PIRTYGDEDVLGEDG----------QTMQSRGSAF--------TTSEN 336

  Fly   345 VSSSS-AGSTSGESAADREADADADTFVDVVGTAPA--APPPPSP-------------PVPATAT 393
            :|.|| ..||||.|.........|      :||:.|  |.|.|.|             |:..:|.
 Frog   337 LSLSSWVSSTSGFSGFQHPQSLTA------LGTSTASLATPIPHPIQGTLPPYSRLGMPITPSAL 395

  Fly   394 APASSSSDPT 403
            |.:...|.||
 Frog   396 ASSMQGSGPT 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 107/196 (55%)
tbx20NP_001030292.1 T-box 96..282 CDD:366363 103/185 (56%)
T-box 98..282 103/183 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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