DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx5

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_031756844.1 Gene:tbx5 / 619589 XenbaseID:XB-GENE-486855 Length:522 Species:Xenopus tropicalis


Alignment Length:440 Identity:156/440 - (35%)
Similarity:210/440 - (47%) Gaps:69/440 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NFAGHFMPPPPPPQPTLPGDVEAKLE-------NNELWQQFHSIGTEMIITKCGRRMFPSMRVSL 96
            |..|.....|..||......|...:|       ..|||.:||.:||||||||.|||||||.:|.:
 Frog    30 NQMGASSKTPTSPQAAFTQQVREGMEGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKV 94

  Fly    97 SGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFS 161
            :||..:..|.:|:::||..|.||||:.::|...|.|||..|.|:|:||:|||||.||..|.:.|.
 Frog    95 TGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQ 159

  Fly   162 KVKLTNNTLDNNGHIVLASMHKYQPRLHVIRTSD---LGQIPWAPQQAF---IFPETEFIAVTAY 220
            |:|||||.||..|||:|.||||||||||:::..:   .|    :...||   :|.||.|||||:|
 Frog   160 KLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFG----SKNTAFCTHVFSETAFIAVTSY 220

  Fly   221 QNDRITKLKIDNNPFAKGFRESGQSRCKR--KINDSPPPTQPEANQVDRSPVT---SPLAKRLR- 279
            ||.:||:|||:|||||||||.|......|  ::.....|..|.:..  |..|:   ||.::..| 
 Frog   221 QNHKITQLKIENNPFAKGFRGSDDMELHRMSRMQSKEYPVVPRSTV--RQKVSSNHSPFSQETRN 283

  Fly   280 LVEEFPQHHHHQSHHSVPMQRHYLLDALEANFYVPAPPPPAIEYARHIGGAYPS-------WAYT 337
            :......:..:|..:.|......||....|...:|....|.....:......|:       :..|
 Frog   284 ITGSSTLNSQYQCENGVSSTSQDLLPTSNAYPSLPHESGPIYHCTKRKASEEPAEHSYKKPYMDT 348

  Fly   338 PPS----------PASSVSSSSAGSTSGESAADREADADADTFVDVVGTAPAAPPPPS------- 385
            .||          |..|.||||..|...|| |.|:|...|       .:|||..|.||       
 Frog   349 SPSEEDPYYRSGYPQPSSSSSSTTSFRTES-AQRQACMYA-------SSAPATEPVPSLEDISCN 405

  Fly   386 --PPVPATATAPASSSSDPTMAKPKR---SSFSISDIL-------GTSSS 423
              ..||:.::........|....|.:   :.|:.|.::       ||..|
 Frog   406 SWSSVPSYSSCTVGGGMQPMERLPYQHFSAHFTSSSLMPRLSNHAGTQPS 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 104/199 (52%)
tbx5XP_031756844.1 T-box_TBX4_5-like 57..241 CDD:410315 100/187 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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