DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx3

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001027524.1 Gene:tbx3 / 613116 XenbaseID:XB-GENE-1018231 Length:701 Species:Xenopus tropicalis


Alignment Length:392 Identity:146/392 - (37%)
Similarity:206/392 - (52%) Gaps:57/392 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PNIADLRLQQQIAQEIYRQQI-MQRLPDPLCGLLPNFAGHFMP-PPPPPQPTLPGDVEAKLENNE 67
            ||.|.|.|...:|:.|..|.: ......|...|....|.|..| ....|:..:..|.:..||..:
 Frog    48 PNGAALSLPGALAKPIMDQLVGAAETGIPFSSLGHQAAAHLRPLKTLEPEEEVEDDPKVHLEGKD 112

  Fly    68 LWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGA 132
            ||:|||..||||:|||.||||||..:|..|||:::|.|.:|:::|...||||||..|:|:.||.|
 Frog   113 LWEQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKA 177

  Fly   133 EPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHKYQPRLHVIRTSDLG 197
            :|:.|:|||:||:|||||:.|.|:.:.|.|:|||||..|.:|..:|.||||||||.|::|.:|:.
 Frog   178 DPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDIL 242

  Fly   198 QIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKINDSPPPTQPEA 262
            ::|::..:.::|||||||||||||||:||:|||||||||||||::|..|.:::            
 Frog   243 KLPYSTFRTYVFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKR------------ 295

  Fly   263 NQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHSVPMQRHYLLDALEANFYVPAPPPPAIEYARHI 327
                         |:|.|....|...|.:..:....:......|.:......:|..||:..:...
 Frog   296 -------------KQLALQSMRPYDDHQKKDNGSSDESSSEQTAYKCFAQTSSPTAPAVGTSSLK 347

  Fly   328 GGAYPSWAYTPPSPASS--VSSSSAGSTSGESAADREADADADTFVDVVGTAPA------APPPP 384
            |        .|||...|  .|....|..:|||..              :.|..:      |.||.
 Frog   348 G--------VPPSDGESDEESRDEGGPDTGESTK--------------ISTTTSEDCRELASPPR 390

  Fly   385 SP 386
            :|
 Frog   391 AP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 107/186 (58%)
tbx3NP_001027524.1 T-box 106..286 CDD:366363 104/179 (58%)
TBX 304..384 CDD:372213 17/101 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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