DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc3 and Tbx20

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_919239.1 Gene:Tbx20 / 57246 MGIID:1888496 Length:445 Species:Mus musculus


Alignment Length:344 Identity:141/344 - (40%)
Similarity:189/344 - (54%) Gaps:57/344 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PPPPPQPTLPGDVEAK----LENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCV 107
            |..|..|.:|.:..||    ||..|||.:||.:||||||||.||||||::|||.||::.|:.|.|
Mouse    83 PLIPTTPIIPSEEMAKIACSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPESKYIV 147

  Fly   108 LLEMVPIGDCRYKFS--GSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTL 170
            |:::||:.:.||:::  .|.|:.||.|:|..|.|:|:||:||.||:....|.:.|.|||||||.|
Mouse   148 LMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNEL 212

  Fly   171 DNNGHIVLASMHKYQPRLHVIR----TSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKID 231
            |.:|||:|.||||||||:|:|:    |:.|..:.....:.||||||.|.|||||||..|||||||
Mouse   213 DQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLITKLKID 277

  Fly   232 NNPFAKGFRESGQSRC-------------KRKINDSPPPTQPEANQVDRSPVTS----------- 272
            :||||||||:|  ||.             |.....||..|..|.:.:.....|:           
Mouse   278 SNPFAKGFRDS--SRLTDIERESVESLIQKHSYARSPIRTYGEEDVLGEESQTTQSRGSAFTTSD 340

  Fly   273 --PLAKRLRLVEEFPQHHHHQSHHSVPMQRHYLLDALEANFYVPAPPPPAIEYARHIGGAYPSWA 335
              .|:..:.....||...|.|     |:.   .|....|:...|.|.|        |.|:.|.::
Mouse   341 NLSLSSWVSSSSSFPGFQHPQ-----PLT---ALGTSTASIATPIPHP--------IQGSLPPYS 389

  Fly   336 Y--TPPSPASSVSSSSAGS 352
            .  .|.:| |:::||..||
Mouse   390 RLGMPLTP-SAIASSMQGS 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 108/196 (55%)
Tbx20NP_919239.1 TBOX 98..290 CDD:238106 107/193 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..337 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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