DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and byn

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster


Alignment Length:391 Identity:137/391 - (35%)
Similarity:188/391 - (48%) Gaps:85/391 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRY 119
            |..::...|::.|||.:|.::..|||:||.||||||.:::|.|||:..|.|.||||.|.|...|:
  Fly    83 LDRNLRISLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRW 147

  Fly   120 KFSGSQWVPAGGAE--PQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMH 182
            |:...:|||.|.||  |.:|  :|:|||||..|.||..:.:.|:||||||.| :.||.|:|.|:|
  Fly   148 KYVNGEWVPGGKAEVPPSNP--IYVHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 209

  Fly   183 KYQPRLHVIRT-SDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSR 246
            ||:||:|::|. |:...:...|     ||||:|||||||||:.:|.|||..|||||.|.::    
  Fly   210 KYEPRVHLVRVGSEQRHVVTYP-----FPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDA---- 265

  Fly   247 CKRKINDSPPPTQPEANQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHS--VPMQRHYLLDALEA 309
                 .:.|....|                             |.:|:.  :|...||...|.. 
  Fly   266 -----KERPDTLYP-----------------------------HDTHYGWLIPPPTHYTAAAAA- 295

  Fly   310 NFYVPAPPPPAIEYARHIGGAYPSWAYTPPSPASSVSSSSAGSTS--GESAADREADADADT--- 369
               |.||||.:|..:..:..:.||     .|.|.||..||.||..  |.|.:.|.......|   
  Fly   296 ---VAAPPPLSIAQSHGLVASCPS-----VSSAESVGPSSGGSCDRYGRSLSSRSVAPTRTTPYS 352

  Fly   370 ---FVDVVGT-------APAAPPPPSPPVPAT----------ATAPASSSSDPTMAKPKRSSFSI 414
               .|...|:       :..:|.|||.|...|          :|:.:|||.....:.|....||.
  Fly   353 RPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSS 417

  Fly   415 S 415
            |
  Fly   418 S 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 92/189 (49%)
bynNP_524031.2 TBOX 86..268 CDD:238106 92/198 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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