DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and org-1

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster


Alignment Length:451 Identity:140/451 - (31%)
Similarity:204/451 - (45%) Gaps:111/451 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PPQPTLPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPI 114
            |..|:|...: ..||...||.|||:.||||||||.||||||:.:|.:.||:..|:|..:::.||:
  Fly   188 PVHPSLAQAI-VVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPM 251

  Fly   115 GDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIV 177
            .|.||:  |..|.||.||.|:|.||.|:::||:|||.|.:|..|.:.|.|:|||||.||.||||:
  Fly   252 DDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHII 316

  Fly   178 LASMHKYQPRLHVI----RTSDLGQIPWAPQ-QAFIFPETEFIAVTAYQNDRITKLKIDNNPFAK 237
            |.|||:||||.|::    :.:.|.:...:.. :.||||||.|.|||||||.|:|:|||.:|||||
  Fly   317 LNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAK 381

  Fly   238 GFRESG-------------------QSRCK--------------------RKINDSPPPT----- 258
            |||:.|                   |:|.|                    :::.:....|     
  Fly   382 GFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQQLKERTAATSNFGL 446

  Fly   259 ------------QPEANQVDRSPVT---------SPLAKRLRLVEEFPQHHHHQSHHSVPMQRHY 302
                        |.:...|.:.|.|         ||.....::.::..|.|..|.......|:.:
  Fly   447 SCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQQQHQQQQQQQHQSQQQH 511

  Fly   303 LLDALEANFYVPAPPPPAIEYARH---IGGAYPSW-AYTPPSPASSVSSSSAGSTSGESAADREA 363
            |....:||     .....::.:::   .|..:.:: |.....|.:..||||              
  Fly   512 LHQQHQAN-----QQQSLLQQSQNHTQYGSYHHAYQAQVQSHPLTPHSSSS-------------- 557

  Fly   364 DADADTFVDVVGTAPAAPPPPSPPVPATATAPASSSSDPTMAKPKRSSFSISDILGTSSSI 424
                           |:||..:.|..:.|||..:..:....|....|:..:.......|||
  Fly   558 ---------------ASPPATAAPGASAATAAVAGGAGAAGAGGATSATQVMSAANIYSSI 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 101/212 (48%)
org-1NP_001285019.1 TBOX 195..389 CDD:238106 101/194 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439066
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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