DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and Tbx19

DIOPT Version :10

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001381159.1 Gene:Tbx19 / 304935 RGDID:1310145 Length:448 Species:Rattus norvegicus


Alignment Length:421 Identity:135/421 - (32%)
Similarity:196/421 - (46%) Gaps:83/421 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GDVEAK-----LENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGD 116
            ||...|     ||:..|||:|..:..|||:||.||||||.:::|::||:..|.|.:||:.||...
  Rat    34 GDPTEKQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTGLDPNAMYSLLLDFVPTDS 98

  Fly   117 CRYKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASM 181
            .|:|:...:|||||..|..|...:|:||:||..|.||....:.||||||||. |...|.|:|.|:
  Rat    99 HRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKVKLTNK-LSGGGQIMLNSL 162

  Fly   182 HKYQPRLHVIRTSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSR 246
            |||:|::|::|.....::    .....||||:|||||||||:.||.|||..|||||.|.::.:..
  Rat   163 HKYEPQVHIVRVGGAHRM----VMNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERN 223

  Fly   247 CKRKINDSPPPTQ--------------PE-------ANQVDRSPVTSPLAKRLRLVEEFP--QHH 288
            ..::|.::...:|              |:       ||....:|:..|........|.:.  :.|
  Rat   224 HLKEIPEAVSESQHVTYSHLGGWILSNPDGMCTTGSANYQYATPLPLPAPHTRHGCEHYAGLRGH 288

  Fly   289 HHQSHHSVPMQRHY-----LLDALEANFYV----------PAPPPPAIEYARHIGG-------AY 331
            ....:.|..|.|::     |:::...|..|          |:.|...|....|..|       .|
  Rat   289 RQAPYPSAYMHRNHSPSVNLIESSSNNLQVFSGPESWTSLPSAPHGGILSVPHTSGPINPGPSPY 353

  Fly   332 PS-WAYT-----PPSPASSVSSSSAGS--------TSGESAADREADADADTFVDVVG------- 375
            |. |..:     |.:..|.|.:|::|:        ||..|....:|...|.  |:|:|       
  Rat   354 PCLWTISNGGGGPVASGSEVHASASGTFLLGSPTVTSPSSLLPTQATTSAG--VEVLGEPSLTSI 416

  Fly   376 -----TAPAAPPPPSPPVPATATAPASSSSD 401
                 ||.|:.|.|....|..|...:.||.|
  Rat   417 AVSTWTAVASHPLPGWGGPGGAGRHSPSSLD 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 T-box_Drosocross-like 59..241 CDD:410332 87/186 (47%)
Tbx19NP_001381159.1 T-box_TBX19-like 36..218 CDD:410327 87/186 (47%)

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