DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and Tbx5

DIOPT Version :10

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001009964.1 Gene:Tbx5 / 304514 RGDID:1305702 Length:517 Species:Rattus norvegicus


Alignment Length:422 Identity:152/422 - (36%)
Similarity:206/422 - (48%) Gaps:63/422 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DPLCGLLPNFA-GHFMPPPPPPQP--TLPG--DVEAKLENNELWQQFHSIGTEMIITKCGRRMFP 90
            |..|...|..| |.....|..||.  |..|  .::..|...|||.:||.:||||||||.||:|||
  Rat    21 DRSCDSKPESALGAPSKSPSSPQAAFTQQGMEGIKVFLHERELWLKFHEVGTEMIITKAGRQMFP 85

  Fly    91 SMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQS 155
            |.:|.::||..:..|.:|:::||..|.||||:.::|...|.|||..|.|:|:||:|||||.||..
  Rat    86 SYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMR 150

  Fly   156 QALLFSKVKLTNNTLDNNGHIVLASMHKYQPRLHVIRTSD---LGQIPWAPQQAF---IFPETEF 214
            |.:.|.|:|||||.||..|||:|.||||||||||:::..:   .|    :...||   :||||.|
  Rat   151 QLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFG----SKNTAFCTHVFPETAF 211

  Fly   215 IAVTAYQNDRITKLKIDNNPFAKGFRESG------QSRCKRKINDSPPPTQPEANQVDRSPVTSP 273
            ||||:|||.:||:|||:|||||||||.|.      .||.:.|.....|.:.......:.||.:|.
  Rat   212 IAVTSYQNHKITQLKIENNPFAKGFRGSDDLELHRMSRMRSKEYPVVPRSTVRHKVANHSPFSSE 276

  Fly   274 LAKRLRLVEEFPQHHHHQSHHSVPMQRHYLLDALEANFYVPAPPPPAIEYARHIGGAY------- 331
             .:.|.........:..::..|.|.|     |.|        |||.....|:.....|       
  Rat   277 -TRALSTSSNLGSQYQCENGVSGPSQ-----DLL--------PPPNPYPLAQEHSQIYHCTKRKD 327

  Fly   332 -----------PSWAYTPPSPASSVSSSSAGSTSGESAADREADADADTFVDVVGTAPAAPPPPS 385
                       ..:..|.||...:...|......|.|.:.|...|.....:      .|:..|||
  Rat   328 EECSSTEHPYKKPYMETSPSEEDTFYRSGYPQQQGLSTSYRTESAQRQACM------YASSAPPS 386

  Fly   386 PPVPATATAPASSSSDPTMAKPKRSSFSISDI 417
            .|||  :....|.::.|:|  |..||.:::.:
  Rat   387 EPVP--SLEDISCNTWPSM--PSYSSCTVTTV 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 T-box_Drosocross-like 59..241 CDD:410332 101/187 (54%)
Tbx5NP_001009964.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46 8/24 (33%)
T-box_TBX4_5-like 54..238 CDD:410315 101/187 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..313 12/56 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..369 6/37 (16%)

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