DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and Tbx21

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001100513.1 Gene:Tbx21 / 303496 RGDID:1308264 Length:528 Species:Rattus norvegicus


Alignment Length:425 Identity:141/425 - (33%)
Similarity:192/425 - (45%) Gaps:91/425 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PDPLCGLLPNFAGHFMPPPPPPQPTLP------GDVEAKLENNELWQQFHSIGTEMIITKCGRRM 88
            |||..||.|.         |.....||      |.:...|.|:.||.:|:...|||||||.||||
  Rat   110 PDPRAGLYPG---------PREDYALPAGLEVSGKLRVALSNHLLWSKFNQHQTEMIITKQGRRM 165

  Fly    89 FPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSP-QRMYLHPESPATGKH 152
            ||.:..:::|||..:.|.:.:::|.:....:::...:||..|.||...| .|:|:||:||.||.|
  Rat   166 FPFLSFTVAGLEPTSHYRMFVDVVLVDQHHWRYQSGKWVQCGKAEGSMPGNRLYVHPDSPNTGAH 230

  Fly   153 WQSQALLFSKVKLTNNTLDNNG---HIVLASMHKYQPRLHVIRTSDLGQIPWAPQQA-------F 207
            |..|.:.|.|:|||||...:|.   .|||.|:||||||||::..:| |:    |:.|       |
  Rat   231 WMRQEVSFGKLKLTNNKGASNNVTQMIVLQSLHKYQPRLHIVEVND-GE----PEAACSANTHIF 290

  Fly   208 IFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKINDSPPPTQPEANQVDRSPVTS 272
            .|.||:|||||||||..||:||||||||||||||:.:|.........|.|..|....:...|.:.
  Rat   291 TFQETQFIAVTAYQNAEITQLKIDNNPFAKGFRENFESMYTSVDTSVPSPPGPNCQLLGGDPYSP 355

  Fly   273 PLAKRLRLVEEF-------PQHHHHQSHH-SVPMQRHYLLDALEANF--------YVPAPPPPAI 321
            .|:.:..:...|       |:....||:. ..|.:..|     |..|        ::|:.|...:
  Rat   356 LLSNQYPVSSRFYPDLPGQPKDMVSQSYWLGTPREPSY-----ETEFRAVSVKPTFLPSAPGTTV 415

  Fly   322 EYAR-----HIGGAYPSWAYTPP--SPASSV-------------SSSSAGSTS------------ 354
            .|.|     ..|..:|.....||  |||...             ||...||.|            
  Rat   416 PYYRGPDVLAPGAGWPMAPQYPPKMSPAGWFRTMRTLPMDPGLGSSEEQGSPSLWTEVTSLQPEP 480

  Fly   355 -----GESAADREADADADTFVDVVGTAPAAPPPP 384
                 ||....|...:...:..|  .::||..|.|
  Rat   481 SDSGLGEGDTKRRRISPYPSSGD--SSSPAGAPSP 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 93/197 (47%)
Tbx21NP_001100513.1 T-box 138..324 CDD:279278 91/190 (48%)
T-box_assoc <392..518 CDD:292794 27/129 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335240
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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