DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx16

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_571133.1 Gene:tbx16 / 30264 ZFINID:ZDB-GENE-990615-5 Length:470 Species:Danio rerio


Alignment Length:423 Identity:166/423 - (39%)
Similarity:210/423 - (49%) Gaps:60/423 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 HFMPPPPPPQPTL-----PGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEE 102
            :|..||||..|..     .|::...||:.|||:.||.|||||||||.||||||..::|||||...
Zfish    10 NFSLPPPPSMPGAGDSYHQGNIRMTLEDPELWRSFHEIGTEMIITKPGRRMFPHCKISLSGLVPY 74

  Fly   103 ASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTN 167
            |.|.:|::|||....|||::..:|..||.||||.|.|.||||:|||.|.||..|.:.|.|:||||
Zfish    75 AKYILLVDMVPEDGLRYKWNKDKWEVAGKAEPQPPYRTYLHPDSPAPGSHWMKQPVSFLKLKLTN 139

  Fly   168 NTLDNNGHIVLASMHKYQPRLHVIRTSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDN 232
            |.||.:|||:|.|||:|.||.|:::..||..:.|:..|.|.||||.|.|||||||.:|||||||:
Zfish   140 NALDQHGHIILHSMHRYHPRFHIVQADDLYSVRWSVFQTFTFPETSFTAVTAYQNTKITKLKIDH 204

  Fly   233 NPFAKGFRESGQSRCKRKINDSPPPTQPEANQVDR-SPVTSPLAKRLRLVEEFPQHHHHQSHHSV 296
            ||||||||:.| :..||:.|.:.|..:..|.::.: |...||...:....|.....|..:....|
Zfish   205 NPFAKGFRDEG-TNSKRRANRNLPDPERVAKKMSKDSEHGSPQDVQPSSCEALDDEHAGRKELEV 268

  Fly   297 PMQRH----------------------------YLLDAL--EANFYVPAPPPPAIEYARHIGGAY 331
            ..:|:                            |..:.|  ..|.|.|        |..|..|..
Zfish   269 KAERYSPWGGACDRDSGHALRPESPLGSDHRDVYSSEQLVPGQNTYQP--------YRFHEYGKS 325

  Fly   332 PSWAYTPPSPASSVSSSSA-GSTSGESAADREADADADTFVDVVGTAPAAPPPPSPPVP------ 389
            ||     ||.:|||..||| ||....|...|..|.......|......:||....||.|      
Zfish   326 PS-----PSSSSSVGGSSACGSAGRPSFESRVLDVATVPDTDSSSKPSSAPEFSLPPHPSAGHQE 385

  Fly   390 -ATATAPASSSSDPTM--AKPKRSSFSISDILG 419
             |.....|.:.:.|.|  ..|..|.:|....||
Zfish   386 YAGVLNMAITQAKPGMLGTHPLYSHYSTEQSLG 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 109/186 (59%)
tbx16NP_571133.1 TBOX 30..217 CDD:238106 109/187 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 254 1.000 Inparanoid score I3166
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.960

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