DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc3 and tbx16l

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_017211524.1 Gene:tbx16l / 30254 ZFINID:ZDB-GENE-980526-171 Length:492 Species:Danio rerio


Alignment Length:436 Identity:137/436 - (31%)
Similarity:190/436 - (43%) Gaps:133/436 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 TLPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCR 118
            :||  |...|::.|||.:|.||||||:|||.|||||||.:|:::||..:..|.|:::|||..:.:
Zfish    46 SLP--VHVSLQDRELWDKFSSIGTEMLITKSGRRMFPSCKVTVTGLNPKVKYVVIMDMVPFDNHK 108

  Fly   119 YKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHK 183
            ||::...|...|.::|..|.|.::||:|||.|:.|....:.|.|:|||||||::||.:||.||||
Zfish   109 YKWNKDCWEVNGSSDPHLPNRFFIHPDSPAPGQKWMQYPISFHKLKLTNNTLNSNGLVVLHSMHK 173

  Fly   184 YQPRLHVIRTSDLGQIPWAPQQ-----AFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESG 243
            ||||||::::.|    |..|..     .|.|||..|||||||||..||||||||||||||||::|
Zfish   174 YQPRLHIVQSPD----PCTPHNPGAYLRFTFPEAAFIAVTAYQNQEITKLKIDNNPFAKGFRDNG 234

  Fly   244 QSR---------------------------------------------------CKRKINDSPPP 257
            .:|                                                   |:...|.|...
Zfish   235 LNRKRFRDKGTQEMQDTDRQVKLDLTANECGIISTAGMSQMVEDVDVSVSSSVDCRDTQNSSSVS 299

  Fly   258 TQP--------------EANQ------VDRSPVTSPLAKRLRLV-------------EEF----P 285
            ..|              .|:|      :.....:||....|..|             ..|    |
Zfish   300 LNPFISAFTNPSSAGGAAAHQTHTLLSLSNRHFSSPRESNLNSVCAALPVSQLSTGHTSFSRLNP 364

  Fly   286 QHHHHQSHHSVPMQ-RHYLLDALEANFYVPAPPPPAIEYARHIGGAYPSWAYTP------PSPAS 343
            |..||.|...:.:| .|..|...:....:|.  ||.:...:....|..:...:|      |.|.:
Zfish   365 QETHHNSRPKIQLQPPHPSLQCHDLELRLPL--PPKLSRVQLSESALRNLEMSPLSDCANPRPLT 427

  Fly   344 SVSSSS---AGSTSGESAADREADADADTFVDVVGTAPAAPPPPSP 386
            ::.:.|   |.:.||:                      ..|.||.|
Zfish   428 NILNRSCFRASTPSGK----------------------LLPNPPQP 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 100/191 (52%)
tbx16lXP_017211524.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.870

Return to query results.
Submit another query.