DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx2b

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_571126.1 Gene:tbx2b / 30253 ZFINID:ZDB-GENE-990726-27 Length:687 Species:Danio rerio


Alignment Length:374 Identity:140/374 - (37%)
Similarity:205/374 - (54%) Gaps:57/374 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PQPTLPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIG 115
            |:..:..|.:..||..:||.|||.:||||:|||.||||||..:|.::||:::|.|.:|:::|...
Zfish    86 PEEEVEDDPKVTLEAKDLWDQFHKLGTEMVITKSGRRMFPPFKVRINGLDKKAKYILLMDIVAAD 150

  Fly   116 DCRYKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLAS 180
            ||||||..|:|:.||.|:|:.|:|||:||:|||||:.|.::.:.|.|:|||||..|.:|..:|.|
Zfish   151 DCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNS 215

  Fly   181 MHKYQPRLHVIRTSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQS 245
            |||||||.|::|.:|:.::|::..:.::||||:||||||||||:||:|||||||||||||::|..
Zfish   216 MHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNG 280

  Fly   246 RCKRKINDSPPPTQPEANQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHSVPMQRHYLLDALEAN 310
            |.::                 |..:|.|   .||:.|:                 ...:|...|:
Zfish   281 RREK-----------------RKQLTLP---SLRMYED-----------------QCKVDRDGAD 308

  Fly   311 FYVPAPPPPAIEYARHIGGAYPSWAYTPPSPASSVSSSSAGSTSGESAADREADADADTFVDVVG 375
            ....:..|.....|.|           .|.|.||....:.||...::..|.|.:.|...  |..|
Zfish   309 SDASSSEPTTGRDAGH-----------SPGPVSSPLRFNRGSRDDKTCTDSEHEMDHQN--DRCG 360

  Fly   376 TAPAAPPPPSPPVPATA-----TAPASSSSD--PTMAKPKRSSFSISDI 417
            .:.:..|.||.|..:.:     ..|.:...|  |...|...|.|||.::
Zfish   361 GSSSPAPKPSSPFRSRSEDWGREKPIAEKKDDYPDSRKTSDSIFSIRNL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 104/186 (56%)
tbx2bNP_571126.1 TBOX 95..278 CDD:238106 102/182 (56%)
TBX 294..361 CDD:204975 17/96 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..452 28/120 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..687
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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