DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and Tbx22

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006257221.1 Gene:Tbx22 / 302369 RGDID:1589764 Length:533 Species:Rattus norvegicus


Alignment Length:372 Identity:130/372 - (34%)
Similarity:181/372 - (48%) Gaps:83/372 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYK--F 121
            ::.:|:.::||::||.|||||||||.|||||||:|:.:.|::....|.|:|::||:...||:  :
  Rat   105 IQVELQGSDLWKRFHDIGTEMIITKAGRRMFPSVRIKVKGMDPVKQYYVILDVVPVDSKRYRYVY 169

  Fly   122 SGSQWVPAGGAEPQ--SPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHKY 184
            ..|||:.||..:..  :| |.|:||:||.:|::|..|.:.|.:||||||.:|:.|||:|.|||||
  Rat   170 HSSQWMVAGNTDHSCITP-RFYVHPDSPCSGENWMRQIISFDRVKLTNNEMDDKGHIILQSMHKY 233

  Fly   185 QPRLHVIRTS---DLGQIPWAPQQ---AFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESG 243
            :||:||:...   ||..|...|.:   .|.|.||||..||||||.:|||||||.||||||||:.|
  Rat   234 KPRVHVVEEDSRIDLSLIQSFPTEGVKTFSFKETEFTTVTAYQNQQITKLKIDRNPFAKGFRDPG 298

  Fly   244 QSRCKRKINDSPPPTQP----------------EANQVDRSPVTSPLAKRLRLVEEFPQHHHHQS 292
            ::   |.:.|....|.|                :......||||                    |
  Rat   299 RN---RGVLDGFLETYPWRPSFTMDFKPFVPDTQNGSSGSSPVT--------------------S 340

  Fly   293 HHSVPMQRHYLLDALEANFYVPAPPPPAIEYARHIGGAYPSWAYTPPSPASSVSSSSAGSTSGES 357
            ....|...:.||.        |:..||.:              |.||        ||.|.|..|:
  Rat   341 SGGAPSPLNSLLS--------PSCSPPTV--------------YIPP--------SSIGMTHPET 375

  Fly   358 AADREADADADTFVDVVGTAPAAPPPPSPPVPATATAPASSSSDPTM 404
            ...   :.:......:..|....|.|...|.|....:..||.|.|.:
  Rat   376 YLH---NVNVPFCYRICPTNYWRPQPFVLPTPERLPSFNSSQSFPPL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 98/195 (50%)
Tbx22XP_006257221.1 TBOX 105..300 CDD:238106 98/195 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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