DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx5a

DIOPT Version :10

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001300611.1 Gene:tbx5a / 30071 ZFINID:ZDB-GENE-991124-7 Length:492 Species:Danio rerio


Alignment Length:385 Identity:135/385 - (35%)
Similarity:194/385 - (50%) Gaps:97/385 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSG 123
            ::..|...|||.:||.:||||||||.|||||||.:|.::||..:..|.:|:::||..|.||||:.
Zfish    53 IKVYLHERELWTKFHEVGTEMIITKAGRRMFPSFKVKVTGLNPKTKYILLMDVVPADDHRYKFAD 117

  Fly   124 SQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHKYQPRL 188
            ::|...|.|||..|.|:|:||:|||||.||..|.:.|.|:|||||.||..|||:|.||||||||:
Zfish   118 NKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRI 182

  Fly   189 HVIRTSD---LGQIPWAPQQAF---IFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESG---- 243
            |:::..:   .|    :...||   :||||.|||||:|||.:||:|||:|||||||||.|.    
Zfish   183 HIVKADENNGFG----SKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDMEL 243

  Fly   244 ----------------QSRCKRKINDSPPPTQPEANQVDRSPV----------TSPLAKRLRLVE 282
                            :|..::::..|..|...:...:..|..          .|..::.| |.:
Zfish   244 HRMSRMQSTKEYPVVPRSTVRQRVGSSQSPFSGDVQGLSASGAISSQYSCENGVSSTSQDL-LPQ 307

  Fly   283 EFPQHHHHQSHHSV-------------PMQRHYL--LDALEANFYVPAPPPPAIEYARHIG--GA 330
            ....|.|.|.:|.:             |.::.|:  ..:.:.::|.|      :.|::.:|  |.
Zfish   308 SSSYHEHTQDYHCIKRKVEDECPAGEHPYKKPYVESSSSEDDHYYRP------LSYSQSLGLSGG 366

  Fly   331 YPSWAYTPPSPASSVSSSSAGSTSGESAADREADADADTFVDVVGTAPAAPPPPSPPVPA 390
            .|   |.|.|                  :.|:|...|           :||.||. |||:
Zfish   367 AP---YRPES------------------SQRQACMYA-----------SAPQPPE-PVPS 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 T-box_Drosocross-like 59..241 CDD:410332 101/187 (54%)
tbx5aNP_001300611.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
T-box_TBX4_5-like 53..237 CDD:410315 101/187 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..352 2/20 (10%)
Blue background indicates that the domain is not in the aligned region.

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