DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and Tbx15

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001382004.1 Gene:Tbx15 / 295315 RGDID:1308094 Length:602 Species:Rattus norvegicus


Alignment Length:462 Identity:150/462 - (32%)
Similarity:207/462 - (44%) Gaps:121/462 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYK-- 120
            :::.:|:..:||::||.|||||||||.||||||:|||.::||:....|.:.:::||:.:.||:  
  Rat   112 EIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMDIVPVDNKRYRYV 176

  Fly   121 FSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHKYQ 185
            :..|:|:.||.|:...|.|:|:||:|.|:|..|..|.:.|.|:|||||.||:.|||:|.||||||
  Rat   177 YHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQGHIILHSMHKYQ 241

  Fly   186 PRLHVIR---TSDLGQIPWAP----QQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESG 243
            ||:||||   :|||......|    .:.|.||||.|..||||||.:||:||||.||||||||:||
  Rat   242 PRVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSG 306

  Fly   244 QSRCKRKINDSPPPTQPEANQVD----RSPVTSPLAKRLRLVEEFPQHHHHQSHHS--------- 295
            ::|           |..||....    |.||      |....|:|......|...:         
  Rat   307 RNR-----------TGLEAIMETYAFWRPPV------RTLTFEDFTTMQKQQGGSTGTSPSTSST 354

  Fly   296 ---VPMQRHYLLDALEANFYVPAPPPPAIEYAR---HIG-----------GAYPSWAYTPPSPAS 343
               .|....:||.        |:..||....|.   ::|           ..||..|.:..:...
  Rat   355 GTPSPSASSHLLS--------PSCSPPTFHLAPNTFNVGCRESQLCNLNLSDYPPCARSNMAALQ 411

  Fly   344 SVSSSSAGSTSGESAADREADADADTFVD--VVGTAPAAPPPPSPPVPATATA------------ 394
            |....|....:...:....|...::||:.  ........|.|||.|..:...|            
  Rat   412 SYPGLSDSGYNRLQSGTASATQPSETFMPQRTPSLISGIPTPPSLPSNSKMEAYGGQLGSFPTSQ 476

  Fly   395 ---------PASSSSDPTM----------------------------------AKPKRSSFSISD 416
                     .|||||.|.|                                  |.|::.|.|.|.
  Rat   477 FQYVMQAGNAASSSSSPHMFGGSHMQQSSYNAFSLHNPYNLYGYNFPTSPRLAASPEKLSASQST 541

  Fly   417 ILGTSSS 423
            :|.:|.|
  Rat   542 LLCSSPS 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 102/195 (52%)
Tbx15NP_001382004.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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