DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc3 and Tbx6

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_035668.2 Gene:Tbx6 / 21389 MGIID:102539 Length:436 Species:Mus musculus


Alignment Length:381 Identity:159/381 - (41%)
Similarity:208/381 - (54%) Gaps:53/381 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LLPNFAG-HFMPPPPPPQPTLPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGL 99
            |||:..| ...||||....:||| |...|||.|||::|.::||||||||.||||||:.|||::||
Mouse    68 LLPSALGPETAPPPPEALHSLPG-VSLSLENQELWKEFSAVGTEMIITKAGRRMFPACRVSVTGL 131

  Fly   100 EEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVK 164
            :.||.|..||::||:...||::.|..|.|:|.|||:.|.|:|:||:|||||.||..|.:.|.:||
Mouse   132 DPEARYLFLLDVVPVDGARYRWQGQHWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSFHRVK 196

  Fly   165 LTNNTLDNNGHIVLASMHKYQPRLHVIRTSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLK 229
            |||:|||.:||::|.||||||||:|::|.:.|....|....:|.||||.||:||||||.|||:||
Mouse   197 LTNSTLDPHGHLILHSMHKYQPRIHLVRATQLCSQHWGGVASFRFPETTFISVTAYQNPRITQLK 261

  Fly   230 IDNNPFAKGFRESGQ-------SRCKRKINDSPPPTQPEA---NQVDRSPVTSPLAKRLRLVEEF 284
            |..|||||||||:|:       :|.|||:. .|.|...||   ......|..|.|...:|     
Mouse   262 IAANPFAKGFRENGRNCKRERDARVKRKLR-GPEPVATEACGSGDTPGGPCDSTLGGDIR----- 320

  Fly   285 PQHHHHQSHHSVPMQRHYLLDALEANFYVPAPP---PPAIEYARHIGGAYPSWAYTPPSPASSVS 346
                     .|.|.|.....:|..|:    |||   |.|..|..|....:.:.::.|....|...
Mouse   321 ---------DSDPEQAPTPQEAASAS----APPCGGPSAEAYLLHPAAFHGAPSHLPARTPSFAE 372

  Fly   347 SSSAGSTSGESAADREADADADTFVDVVGTAPAAPPPPSPPVPATATAPASSSSDP 402
            :...|..:..|||          |:|:         .|.|...|...||:..|..|
Mouse   373 APDPGRPAPYSAA----------FLDL---------QPGPGGSAYQAAPSVPSFAP 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 109/193 (56%)
Tbx6NP_035668.2 TBOX 90..277 CDD:238106 110/187 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831463
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I3037
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003805
OrthoInspector 1 1.000 - - otm43723
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6331
SonicParanoid 1 1.000 - - X4271
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.880

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