DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc3 and Tbx15

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_033349.2 Gene:Tbx15 / 21384 MGIID:1277234 Length:602 Species:Mus musculus


Alignment Length:478 Identity:154/478 - (32%)
Similarity:215/478 - (44%) Gaps:133/478 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PPPPQPTLPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMV 112
            |.|...:...:::.:|:..:||::||.|||||||||.||||||:|||.::||:....|.:.:::|
Mouse   102 PVPAAMSSMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMDIV 166

  Fly   113 PIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGH 175
            |:.:.||:  :..|:|:.||.|:...|.|:|:||:|.|:|..|..|.:.|.|:|||||.||:.||
Mouse   167 PVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQGH 231

  Fly   176 IVLASMHKYQPRLHVIR---TSDLGQIPWAP----QQAFIFPETEFIAVTAYQNDRITKLKIDNN 233
            |:|.||||||||:||||   :|||......|    .:.|.||||.|..||||||.:||:||||.|
Mouse   232 IILHSMHKYQPRVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPETVFTTVTAYQNQQITRLKIDRN 296

  Fly   234 PFAKGFRESGQSRC-KRKINDS-----PP-----------------------PT-------QPEA 262
            |||||||:||::|. ...|.::     ||                       ||       .|.|
Mouse   297 PFAKGFRDSGRNRTGLEAIMETYAFWRPPVRTLTFEDFTTMQKQQGGSTGTSPTTSSTGTPSPSA 361

  Fly   263 NQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHSVPMQRHYLLDALEANFYVPAPPPPAIEYARHI 327
            :....||..||           |..|...:..:|..:...|.: |..:.|.|.        ||..
Mouse   362 SSHLLSPSCSP-----------PTFHLAPNTFNVGCRESQLCN-LNLSDYPPC--------ARSN 406

  Fly   328 GGAYPSWAYTPPSPASSVSSSSAGSTSGESAADREADADADTFVD--VVGTAPAAPPPPSPPVPA 390
            ..|..|:.....|..:.:.|.:|.:|.           .::||:.  ........|.|||.|..:
Mouse   407 MAALQSYPGLSDSGYNRLQSGTASATQ-----------PSETFMPQRTPSLISGIPTPPSLPSNS 460

  Fly   391 TATA---------------------PASSSSDPTM------------------------------ 404
            ...|                     .|||||.|.|                              
Mouse   461 KMEAYGGQLGSFPTSQFQYVMQAGNAASSSSSPHMFGGSHMQQSSYNAFSLHNPYNLYGYNFPTS 525

  Fly   405 ----AKPKRSSFSISDILGTSSS 423
                |.|::.|.|.|.:|.:|.|
Mouse   526 PRLAASPEKLSASQSTLLCSSPS 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 102/195 (52%)
Tbx15NP_033349.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..95
TBOX 113..308 CDD:238106 102/194 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..369 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..444 5/29 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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