DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx-35

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_495059.2 Gene:tbx-35 / 191239 WormBaseID:WBGene00006554 Length:325 Species:Caenorhabditis elegans


Alignment Length:323 Identity:79/323 - (24%)
Similarity:124/323 - (38%) Gaps:49/323 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 MPPPPPPQPTLPGD--VEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCV 107
            |..|.|...:...|  :.|.|.|::::|.||....|.::....|..||:...::..||.:..|.:
 Worm     7 MNTPSPSMLSFDMDIPITAFLHNSDVFQLFHPDIMEQVVVNKERVFFPTPSFNVLNLESDCLYKM 71

  Fly   108 LLEMVPIGDCRYKFS--GSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTN-NT 169
            .|......:.|::|:  ..||.............:::||....||..|....:.|. :|:|| .:
 Worm    72 SLRFDKTNNKRFQFNRQTKQWTEYDKVSNHKESEVFVHPSEIRTGDDWMKSPVEFF-IKVTNLRS 135

  Fly   170 LDNNGHIVLASMHKYQPRL---HVIRTSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKID 231
            .:::..|.|.|..||||.|   .|.|..........|.....|....|||.|.|.:.||..:|..
 Worm   136 SESDEVICLESQCKYQPTLLIQKVFRDCFGCFQAHGPPVEIKFALLTFIATTRYCSRRIADIKSS 200

  Fly   232 NNPFAKGFRESGQSRCKRKINDSPPPTQPEANQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHSV 296
            .|||:     |..::.|.|.|.....:|.|...::.|                   ..|||    
 Worm   201 LNPFS-----SQDTKKKNKRNTLKAVSQEENQPIENS-------------------SFHQS---- 237

  Fly   297 PMQRHYL----LDALEANFYVPAPPPPAIEYARHIGGA-YPSW-----AYTPPSPASSVSSSS 349
             ....||    || |::...:...|..:.|....:..: :|.|     ..:.|:|:||..|.|
 Worm   238 -FSNQYLSKPDLD-LKSTTLLQIAPDHSFEPTNFVSSSHFPCWDSIFCQQSFPTPSSSPYSDS 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 52/194 (27%)
tbx-35NP_495059.2 TBOX 23..215 CDD:214656 52/197 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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