DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx-42

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_500749.1 Gene:tbx-42 / 190421 WormBaseID:WBGene00022000 Length:308 Species:Caenorhabditis elegans


Alignment Length:317 Identity:79/317 - (24%)
Similarity:129/317 - (40%) Gaps:66/317 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEAKLENNELWQQFHSIGTEMI-----ITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCR 118
            :..|:.|.|||::.:. ..|||     ||.    :||.::..:|||||.:.|.::|.:..:.:.|
 Worm     7 IVVKMSNEELWKERYP-NMEMISNSKRITP----IFPEIKFKISGLEENSRYVLVLSLEKMDNIR 66

  Fly   119 YKFS-GSQWVPAGGAEPQSPQRM--YLHPESPATGKHWQSQALLFSKVKLTNN--TLDNNGHIVL 178
            |..: ..:|.|:...:|:....|  :.|||....||...::.:.|:.|::|.:  ..:......:
 Worm    67 YGINENKEWAPSSARKPKPHHNMKFFFHPEGTKLGKELMAETVEFTSVRITTSEKLSEKENVFYV 131

  Fly   179 ASMHKYQPRLHVIRTSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESG 243
            .:||||.|.| .||....|:|   ....|.....:|..|:.||...:.:.|.|.|..:. |....
 Worm   132 HTMHKYVPVL-TIRNLTTGEI---ASNIFKMEIAQFFPVSIYQQASMGRWKSDLNKHST-FGNRS 191

  Fly   244 QSRCKRKIND----------SPPPTQPEANQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHSVPM 298
            :...|||.:|          |..|.:.:.  ||.|.||..:                       .
 Worm   192 EGGIKRKTSDAAGQLPSKRSSKKPVKKDV--VDNSEVTLEV-----------------------K 231

  Fly   299 QRHYLLDALEANF--YVPAPPPPAIEYARHIGGAYPSWAYTP-----PSPASSVSSS 348
            ...||::..|:|.  |:|:.|    .|:......||...|:|     |.|.|.:..|
 Worm   232 TSQYLVNQNESNLTEYIPSSP----LYSSQNQYQYPFHPYSPFDSSIPYPYSPMDYS 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 52/195 (27%)
tbx-42NP_500749.1 T-box 9..190 CDD:279278 52/190 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28944
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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