DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx-11

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_498317.1 Gene:tbx-11 / 185575 WormBaseID:WBGene00006547 Length:322 Species:Caenorhabditis elegans


Alignment Length:290 Identity:75/290 - (25%)
Similarity:132/290 - (45%) Gaps:43/290 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYK 120
            |..|......:.||:..|....||:||..|||:||::..:::||:....|.:.:.:..:.|.:.:
 Worm     4 PISVTLSSTTDPLWRSCHEYDNEMVITVNGRRIFPTLEYTVTGLDTFKLYSMCMHLDLVDDKKLR 68

  Fly   121 FSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNG---HIVLASMH 182
            |:|.||..:...|.:.|.|...|.....|||.|..:.:.|.::::||.....:|   ::.|.:.|
 Worm    69 FTGGQWAESVSTEKKDPPRKVWHHNGSQTGKDWMLRNVSFDQIRITNRKSKEDGNASYVHLLTQH 133

  Fly   183 KYQPRLHVIRTSDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSRC 247
            :|.|.|.:.....|       ......|.::||:||||....:..||.:|||::.|.|:.     
 Worm   134 RYIPVLTIYEGDQL-------VHTARIPHSQFISVTAYHKGELNTLKTNNNPYSTGSRKD----- 186

  Fly   248 KRKINDSPPPTQPEANQVDRSPVTSPLAKRLR-LVEEFPQHHHHQSHHSVPMQRHYLLDALEANF 311
            :|:...||..::..:::...||   |.||::: :....|.       :|| :.:..||.:|..  
 Worm   187 RRRERQSPVYSEGTSSEKSISP---PPAKKIKDMAPALPD-------YSV-ISKPNLLQSLIF-- 238

  Fly   312 YVPAPPPPAIEYARHIGGAYPSWAYTPPSP 341
                   |.|       ...||.:.:||:|
 Worm   239 -------PMI-------AEQPSTSQSPPAP 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 53/189 (28%)
tbx-11NP_498317.1 TBOX 4..189 CDD:238106 54/196 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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