DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx-38

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_499526.1 Gene:tbx-38 / 182861 WormBaseID:WBGene00006557 Length:303 Species:Caenorhabditis elegans


Alignment Length:283 Identity:79/283 - (27%)
Similarity:135/283 - (47%) Gaps:40/283 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 TLPGDVEAKLENNELWQQFHSIGTEMIITK-CGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDC 117
            |.|..::..|...|:|::|:. .||||:|: .||.:||.:...:.||:..:.|.:.:.:..:...
 Worm     5 TSPSGIKVSLSTPEIWEEFYP-KTEMIVTRNRGRVIFPHLDYIIKGLDPGSLYSIYIHLERVDGI 68

  Fly   118 RYKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNN-TLDNNGHIVLASM 181
            :|||...:|......:|..|.:...||....||..|.|:.:.|:.:|:||| .:.:...|::.||
 Worm    69 KYKFDAGEWKEFAKGDPILPIQYKEHPRGKRTGAEWMSEPVSFAHIKITNNPEIKDQKVILVQSM 133

  Fly   182 HKYQPRLHV--IRTSDLG-QIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRESG 243
            ||:.|.:.|  :|....| |..::.:| |....|||:.||||||:.:..||:.:|.||.|||.:|
 Worm   134 HKHIPVVTVKQVRHYKTGYQEDFSGEQ-FRLEATEFMVVTAYQNEILKNLKVHHNKFASGFRSNG 197

  Fly   244 QSRC---KRKINDSPPPTQPEANQVDRSPVTSP--LAKRLRLVEEFPQHHHHQSHHSVPMQRHYL 303
            :.|.   .....:|||         .||.:.:|  ::.::.|.::.|.:.:.             
 Worm   198 KRRLSSDSENSENSPP---------KRSKLVTPPTISPQIDLPQQTPYYFNQ------------- 240

  Fly   304 LDALEANFYVPAPPPPAIEYARH 326
                  ||..|....|....|::
 Worm   241 ------NFVAPQNYQPQFASAQN 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 63/191 (33%)
tbx-38NP_499526.1 TBOX 9..199 CDD:238106 63/191 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156542
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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