DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx-8

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_499287.2 Gene:tbx-8 / 176450 WormBaseID:WBGene00006545 Length:315 Species:Caenorhabditis elegans


Alignment Length:354 Identity:109/354 - (30%)
Similarity:152/354 - (42%) Gaps:83/354 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSG 123
            |..:.:.::||..||....|||:||.||:|||.:...:.||.....|.::|.:.|..|.|||||.
 Worm     7 VTLREDQDKLWNLFHYHKNEMIVTKSGRKMFPKLEYVVRGLTPNKLYAMMLHIEPSDDHRYKFSS 71

  Fly   124 SQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIV-LASMHKYQPR 187
            .:||.:|.||.....:...|.:...:||.|.:..:.|.:||:||.....|..:: |.|||||.|.
 Worm    72 GEWVKSGKAEKHREPKKLWHADGVRSGKEWMTNPVCFDRVKITNCAESTNASMIFLHSMHKYTPV 136

  Fly   188 LHVIRTSDLGQIPWAPQQAFIFPE-------------TEFIAVTAYQNDRITKLKIDNNPFAKGF 239
            :.:..:..        :..|..|:             ||||||||||||.:.||||..|||||||
 Worm   137 MSIYESPS--------ESPFSVPQPSTRLVTSVRLTYTEFIAVTAYQNDAVIKLKIKFNPFAKGF 193

  Fly   240 RESGQSRCKRKINDSPPPTQPEANQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHSVPMQRHYLL 304
            ||..||..||....:...|..|::    |.|:||..|:.|.|...|           |:....|.
 Worm   194 REGSQSDRKRNSPSADDSTTDESS----SQVSSPQPKKSRTVSVSP-----------PLMPRILP 243

  Fly   305 DALEANFYVPAPPPPAIE-------YARHIG--GAYPSWAY---------------TPPSPASSV 345
            ..:        ||||||.       |..|:.  |.:|...:               |||....:|
 Worm   244 TMI--------PPPPAINPLFYSLPYFSHLAATGNFPPVPFQFPFGLPCFSPMSFPTPPPSLKNV 300

  Fly   346 SSSSAGSTSGESAADREADADADTFVDVV 374
            .              :|...|.:..::||
 Worm   301 K--------------KEEQEDIEQEINVV 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 75/199 (38%)
tbx-8NP_499287.2 TBOX 4..199 CDD:238106 75/199 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156548
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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