DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx-2

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001370674.1 Gene:tbx-2 / 175698 WormBaseID:WBGene00006543 Length:423 Species:Caenorhabditis elegans


Alignment Length:436 Identity:145/436 - (33%)
Similarity:217/436 - (49%) Gaps:102/436 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PNF------AGHFMPPP---PPPQPTLPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMR 93
            ||.      || |.|.|   ||....:..|.:.:|:..||||||...||||:|||.|||:||:.|
 Worm    32 PNLFFSMLQAG-FPPGPVGSPPEDDGVTDDPKVELDERELWQQFSQCGTEMVITKSGRRIFPAYR 95

  Fly    94 VSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQAL 158
            |.:|||::::.|.|::::||..:.||||:.|:|:.||.|:|:.|:.:|:||:||:||:||.|:..
 Worm    96 VKISGLDKKSQYFVMMDLVPADEHRYKFNNSRWMIAGKADPEMPKTLYIHPDSPSTGEHWMSKGA 160

  Fly   159 LFSKVKLTNNTLDNNGHIVLASMHKYQPRLHVIRTSDLGQIPWAPQQAFIFPETEFIAVTAYQND 223
            .|.|:|||||..|.:|:.:|.|||||||||||:|.:|...:.::..:.|:|.||||||||||||:
 Worm   161 NFHKLKLTNNISDKHGYTILNSMHKYQPRLHVVRCADRHNLMYSTFRTFVFRETEFIAVTAYQNE 225

  Fly   224 RITKLKIDNNPFAKGFRESGQSRCKRK---------INDSPP----------PTQPEANQVD--- 266
            ::|:|||:|||||||||::|..:.::|         ...|||          |...|:|..|   
 Worm   226 KVTELKIENNPFAKGFRDAGAGKREKKRQLHRMNGDATQSPPGKTASLPTHSPHPSESNSEDDEP 290

  Fly   267 ----------RSPVTSPLAKRLRLVEEFPQHHHHQS------------HHSVPMQ--RHYLLDAL 307
                      ::|.||.|:  .........||..:|            :.::||.  .|:.:..|
 Worm   291 TLKKCKPEPSQTPTTSSLS--TSTTPTLSAHHPLRSPQFCIPPPIDMMYQNMPMDLLAHWQMATL 353

  Fly   308 EANFYVPAPPPPAIEYARHIGGAYPSWAYTPPSPASSVSSSSAGSTSGESAADREADADADTFVD 372
            ...|                     |.|...|:.|:|:.|......|.|...:..::...:    
 Worm   354 FPQF---------------------SMALNSPAAAASLLSKHLAKASSECKVEATSEDSEE---- 393

  Fly   373 VVGTAPAAPPPPSPPVPATATAPASSSSDPTMAKPKRSSFSISDIL 418
                               |..|.......::..||:..|.:.|:|
 Worm   394 -------------------AEKPEVKKEQKSVTPPKKGGFDVLDLL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 101/186 (54%)
tbx-2NP_001370674.1 T-box_TBX2_3-like 59..243 CDD:410314 99/183 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I2074
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.860

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