DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and mab-9

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_493750.1 Gene:mab-9 / 173441 WormBaseID:WBGene00003106 Length:346 Species:Caenorhabditis elegans


Alignment Length:306 Identity:116/306 - (37%)
Similarity:170/306 - (55%) Gaps:48/306 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LPGDVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRY 119
            ||  :|.|||.:|||.:|..:||||||||.||||||:::||.:.:..:|.|.:.|::||:...||
 Worm    75 LP--IECKLEGSELWAKFFDLGTEMIITKSGRRMFPTVKVSFTNVILDALYYIFLDVVPVDSKRY 137

  Fly   120 K--FSGSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMH 182
            :  ::.|.|:.||.|||....|.||||:||.||.......:.|.|.|||||.:|..||::|.|||
 Worm   138 RYIYNKSAWLTAGKAEPVPKNRYYLHPDSPFTGDQLLKHVISFEKTKLTNNEVDKTGHLILNSMH 202

  Fly   183 KYQPRLHVIRTS-----DLGQIPWAPQQ--AFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFR 240
            |||||:|:::..     |..::..:.::  .:.||||:|:|||||||..||||||:.||||||||
 Worm   203 KYQPRIHIVQRQKANPLDPNKVVMSEEKHCTYTFPETQFMAVTAYQNQLITKLKIEKNPFAKGFR 267

  Fly   241 ESGQSRCKRKINDSPPPTQPEANQVDRSPVTSPLAKRLRLVEEFPQHHHHQSHHSVPMQRHYLLD 305
            :               ||....::::|||....|:           :.:|.|.....|.:..|..
 Worm   268 D---------------PTGRSPDEMERSPGDMMLS-----------NFYHSSALQQAMFQQCLSK 306

  Fly   306 ALEANFYVPAPPPPAIEYARHI---GGAYPSWAYTPPSPAS-SVSS 347
            .|:.|       |..:...:::   |.:.|:....|.:||. |:.|
 Worm   307 TLQLN-------PSIMMLYQNVFPTGNSLPAAPTVPGNPAEISIKS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 94/195 (48%)
mab-9NP_493750.1 TBOX 76..272 CDD:238106 97/212 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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