DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doc3 and Tbx10

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001001320.1 Gene:Tbx10 / 109575 MGIID:1261436 Length:385 Species:Mus musculus


Alignment Length:397 Identity:135/397 - (34%)
Similarity:186/397 - (46%) Gaps:70/397 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 YRQQIMQRLPDPLCGLLPNFAGHFMPPPPPPQPTLPGDVEAKLENNELWQQFHSIGTEMIITKCG 85
            :..::..|.|...|.:.........|....|:......|..:||...||::|:.:|||||:||.|
Mouse    27 WESRLGTRFPSGSCTMSTEAQAMAEPTGQGPKNPRVSSVMVQLEMKPLWEEFNQLGTEMIVTKAG 91

  Fly    86 RRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYK--FSGSQWVPAGGAEPQSPQRMYLHPESPA 148
            |||||:.:|.:.|::..|.|.:|::.:|:.|.||:  |..|.|:.||.|:|.:|.|::.||:|||
Mouse    92 RRMFPTFQVKILGMDTLADYALLMDFIPLDDKRYRYAFHSSAWLVAGKADPATPGRVHFHPDSPA 156

  Fly   149 TGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHKYQPRLHVI---RTSDLGQIPWAPQQAFIFP 210
            .|..|..|.:.|.|:|||||.:|:||||:|.|||:||||.||:   ...|..:......::|:|.
Mouse   157 KGAQWMRQIVSFDKLKLTNNLMDDNGHIILNSMHRYQPRFHVVFVDPRKDSARYAQENFKSFVFT 221

  Fly   211 ETEFIAVTAYQNDRITKLKIDNNPFAKGFRESGQSRCKRKINDSPPPT-QPEANQVDRSPVT-SP 273
            ||:|.|||||||.|||:|||.:|||||||||:..        ||.|.| :|..:...||..: ||
Mouse   222 ETQFTAVTAYQNHRITQLKIASNPFAKGFREADP--------DSWPVTPRPLLSIPARSRSSLSP 278

  Fly   274 LAKRLRLVEEFPQHHHHQSHHSVPMQRHYLLDALEANFYVPAPP---PPAIEYARHIGGAYPSWA 335
            ...:.....|........|....|.|.|        |..:|||.   .||..........||.  
Mouse   279 CLLKGSAEREKDTSKASASSSRTPTQPH--------NQLLPAPDVLLAPATYRPLPYQNLYPG-- 333

  Fly   336 YTPPSPASSVSSSSAGSTSGESAADREADADADTFVDVVGTAPAAPPPPS--PPVPATATAPASS 398
                      |.|.||                              ||.:  .|.|....:.|..
Mouse   334 ----------SPSRAG------------------------------PPRARLAPYPLPNISTAGD 358

  Fly   399 SSDPTMA 405
            ..|||:|
Mouse   359 QEDPTLA 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 95/191 (50%)
Tbx10NP_001001320.1 TBOX 67..254 CDD:238106 94/186 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..310 6/34 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..359 11/72 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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