DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbx4

DIOPT Version :10

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_002933872.1 Gene:tbx4 / 100488041 XenbaseID:XB-GENE-951382 Length:541 Species:Xenopus tropicalis


Alignment Length:273 Identity:58/273 - (21%)
Similarity:89/273 - (32%) Gaps:98/273 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FWDLLRP-YAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTINLFSK---FG 67
            || ||.| :|...|..:|  ..:|..|||   |....|:||.......|:.|...:.|.:   ||
 Frog   107 FW-LLTPFFAVSSGLLYL--AILATGLSF---QANVTVQGFTSVAFTMLSVFTIRSHFKRMLFFG 165

  Fly    68 AYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKD------GVSVERNKLFSEWVRECVEL 126
                |:|.....||        ||....:...:.||:.:      |::...:..|      |::|
 Frog   166 ----FMVPTKMLPL--------FFLILALFLPHAPVLSNVCGILVGIAYGMSGFF------CLDL 212

  Fly   127 LE--------------LLGIPV--LKANGEAEALCAQ-----------------LNSQGFVDACI 158
            .|              |..||:  ......||...||                 ...||..:|..
 Frog   213 PESIMSRIDQIFLCRLLKRIPIWTYVPGSSAERNAAQSRKINPPPGSYPTQQFYTTPQGLHEAYS 277

  Fly   159 ---TPDSDAFLFGAMCVIKDIKPNSREP----FECYHM-----SHIESGLGLKRKHLIAISLLVG 211
               .|.:...:..||..:.....:...|    ::.:||     ||:::          :.|..||
 Frog   278 PYHNPKASGLVSPAMAPVGPSPYSMTSPPGAFYQTHHMCSGGHSHLDA----------STSTTVG 332

  Fly   212 NDYDSGGVLGIGV 224
                     |:||
 Frog   333 ---------GVGV 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 T-box_Drosocross-like 59..241 CDD:410332 40/220 (18%)
tbx4XP_002933872.1 T-box_TBX4_5-like 56..240 CDD:410315 37/156 (24%)

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