DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doc3 and tbxtb

DIOPT Version :9

Sequence 1:NP_648280.1 Gene:Doc3 / 39036 FlyBaseID:FBgn0035954 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_001343633.3 Gene:tbxtb / 100004296 ZFINID:ZDB-GENE-081028-48 Length:424 Species:Danio rerio


Alignment Length:415 Identity:135/415 - (32%)
Similarity:184/415 - (44%) Gaps:117/415 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DVEAKLENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS 122
            :::..|:.|||||:|.::..|||:||.||||||.::|::|||:..|.|..||:.||..:.|:|:.
Zfish    39 ELKVALDENELWQKFKALTNEMIVTKNGRRMFPVLKVNISGLDPNAMYSFLLDFVPADNHRWKYV 103

  Fly   123 GSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMHKYQPR 187
            ..:|||.|..|||:|..:|:||:||..|.||....:.||||||||. |:..|.|:|.|:|||:||
Zfish   104 NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKSCVSFSKVKLTNK-LNGGGQIMLNSLHKYEPR 167

  Fly   188 LHVIRTSDLGQIPWAPQQ---AFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGF---------- 239
            :|::|..       .||:   ...||||:|||||||||:.||.|||..|||||.|          
Zfish   168 IHIVRVG-------GPQRMITTHAFPETQFIAVTAYQNEEITSLKIKYNPFAKAFLDTKERSDHK 225

  Fly   240 ---------RESGQSRCKRKINDSPPPTQPEAN---QVD---------------------RSPVT 271
                     ::||.|:.......|.....|.||   |::                     .:|..
Zfish   226 EIIEDVSESQQSGYSQLSSWFLPSAGSLCPSANPHAQLNSALSLSTSHGCERYSTLRGHRSAPYP 290

  Fly   272 SPLAKRL----------RLVEEFPQHHH-----HQSHHSV-PM---------------------- 298
            |..|.|.          ..:...|.|.:     ..||.|| ||                      
Zfish   291 STYAHRTASPTGYSDSSSCLSMLPSHDNWSSLQMSSHSSVLPMGHSSGPNSNTSQYTSLWSVGNS 355

  Fly   299 -QRHYLLDALEANFYVPAPPPPAIEYARHIGGAYPSWAY--TPPSPASSVSSSSAGSTSGESAAD 360
             |...:..:|.:.|            .|...|.|.|.|:  |.||..|.:..::|...|      
Zfish   356 SQSGSMSSSLGSQF------------LRGSAGHYSSLAHPLTAPSSGSPLYDTAASEAS------ 402

  Fly   361 READADADTFVDVVGTAPAAPPPPS 385
             |.|..|.|.:....|..|   |||
Zfish   403 -EYDTAAHTRLPTAWTHVA---PPS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Doc3NP_648280.1 TBOX 58..245 CDD:238106 94/208 (45%)
tbxtbXP_001343633.3 TBOX 40..221 CDD:238106 92/188 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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