DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and ube3a

DIOPT Version :10

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_001007319.1 Gene:ube3a / 792398 ZFINID:ZDB-GENE-041114-190 Length:857 Species:Danio rerio


Alignment Length:730 Identity:172/730 - (23%)
Similarity:305/730 - (41%) Gaps:156/730 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 ERSSTRGVNLMGVASSKQSKQQWRKLDSAEV-VQVSRICGMYYAALNTLSQMKLDILTGICY-SD 499
            |.|::.|      ..|...:...:||...|| |.:..:..:|...|:. .:::...|..:.| |.
Zfish   190 EASASSG------DGSSHGENNVQKLGPVEVSVDIDAVRRVYDRLLSN-EKIEAAFLNALVYLSP 247

  Fly   500 NVLYDI-WLLITSLGPNCGMKEYLE---LLKSETNLQKPQTAMLML--FCDCMTH---------- 548
            ||..|: :..:.:..||     ||.   ::...:||..|:...:.|  ||..|:.          
Zfish   248 NVECDLTYHNVYAADPN-----YLNVFIIVMENSNLHSPEYLEIALPQFCKAMSKLPLPALAKLA 307

  Fly   549 -----------------------YVTILDEHEMYTEQNPFKLNDYVL-------LTYFLNNILYK 583
                                   |..|.:|   ::..|....:|.|:       :.|:.|.:...
Zfish   308 RLWSQYGVDQIRRLVETFQQLITYTVISNE---FSSDNLVNEDDGVVAATKCLKIVYYANVLGGD 369

  Fly   584 LINDN-------------------LLAGAKNIVQHPVFLSLHTLMLCLYRRDCRRPFTP------ 623
            |..|:                   ||...:...:.|....|.|.| .:...|||:|..|      
Zfish   370 LDTDHNEEDDDEPIPESSELTLQELLGEERRNKKGPRVDPLETEM-GIRASDCRKPLIPFEEFIN 433

  Fly   624 -PKHWLIPEVKPSTFINDLEKAKRNAM----LLLAKMPHI-IPHEDRVKLFRKFVQNEKAVMGLT 682
             |.:.::...|..||.....::|.:.|    :|.|...:: :.:::|::::.:  :...|:..|.
Zfish   434 EPLNEVLEMDKDYTFFKVETESKFSFMTCPFILNAVTKNLGLYYDNRIRMYSE--RRITALYSLV 496

  Fly   683 ESACASPRSALIVIHRDRIVEDG---YRQLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKE 744
            :....:|...| .:.||.|::|.   ...:|.:....||..:.|.|..:|     |:|:.||.||
Zfish   497 QGQQLNPYLRL-KVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQ-----GVDEGGVSKE 555

  Fly   745 FLEETIKKVFDPSLNLFKTTSDQRLY-PSPISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFAS 808
            |.:..::::|:|.:.:|......:|: .:|.|:..:..   |..:|.:||.|:|...::||.|..
Zfish   556 FFQLVVEEIFNPDIGMFTYDESTKLFWFNPSSFENEGQ---FTLIGIVLGLAIYNNCILDVHFPM 617

  Fly   809 FFLSQLLGQTQQALYSCMDELPSLDNELYRSLTFIKHYKQDV-SDLNLTFSVDQ-DVMGKIVTLA 871
            ....:|:|:.     ....:|......|::||..:..|:.:| .|:.:||.:.| |:.|..:...
Zfish   618 VIYRKLMGKK-----GTFRDLADSHPVLFQSLKDLMEYEGNVEEDMMITFQISQTDLFGNPLMYD 677

  Fly   872 L-HPGGKARVVNDHNK---LVYIHYMAFFHMNTQIREQTIAFNRGFRSIVNPEWLS-LFSPPELQ 931
            | ..|.|..|.|::.|   .:|..||    :|..:.:|..||.|||..:.|...|. ||.|.|::
Zfish   678 LKESGDKIPVTNENRKDFVALYAEYM----LNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIE 738

  Fly   932 RLISGDTSPLDLKDLQKHTHYYGGFHDTHQVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLG 996
            .||.|..: ||.:.|::.|.|.||::...:::...|:.: ..|.:|:::|||:|.|...:.|:.|
Zfish   739 LLICGSRN-LDFQALEESTEYDGGYNKDSRIIRDFWETV-HSFEQEKKRLFLQFTTGTDRAPVGG 801

  Fly   997 FAHLEPPFSIRCVEVSDDEDTGDTIGSVIRGFFAIRKKDP-LNRLPTSSTCFNLLKLPNYQKKST 1060
            ...|:                           ..|.|..| .:|||||.||||:|.||.|.....
Zfish   802 LGKLK---------------------------MIIAKNGPDSDRLPTSHTCFNVLLLPEYSTVEK 839

  Fly  1061 LRDKLRYAVSSNTGF 1075
            |:::|..|::...||
Zfish   840 LKERLLKAITYAKGF 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 IQCD 20..50 CDD:467745
HECTc 694..1076 CDD:238033 110/394 (28%)
ube3aNP_001007319.1 AZUL 6..60 CDD:465173
HECTc 505..855 CDD:238033 111/397 (28%)
Blue background indicates that the domain is not in the aligned region.

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