DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and ube3a

DIOPT Version :9

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_001007319.1 Gene:ube3a / 792398 ZFINID:ZDB-GENE-041114-190 Length:857 Species:Danio rerio


Alignment Length:730 Identity:172/730 - (23%)
Similarity:305/730 - (41%) Gaps:156/730 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 ERSSTRGVNLMGVASSKQSKQQWRKLDSAEV-VQVSRICGMYYAALNTLSQMKLDILTGICY-SD 499
            |.|::.|      ..|...:...:||...|| |.:..:..:|...|:. .:::...|..:.| |.
Zfish   190 EASASSG------DGSSHGENNVQKLGPVEVSVDIDAVRRVYDRLLSN-EKIEAAFLNALVYLSP 247

  Fly   500 NVLYDI-WLLITSLGPNCGMKEYLE---LLKSETNLQKPQTAMLML--FCDCMTH---------- 548
            ||..|: :..:.:..||     ||.   ::...:||..|:...:.|  ||..|:.          
Zfish   248 NVECDLTYHNVYAADPN-----YLNVFIIVMENSNLHSPEYLEIALPQFCKAMSKLPLPALAKLA 307

  Fly   549 -----------------------YVTILDEHEMYTEQNPFKLNDYVL-------LTYFLNNILYK 583
                                   |..|.:|   ::..|....:|.|:       :.|:.|.:...
Zfish   308 RLWSQYGVDQIRRLVETFQQLITYTVISNE---FSSDNLVNEDDGVVAATKCLKIVYYANVLGGD 369

  Fly   584 LINDN-------------------LLAGAKNIVQHPVFLSLHTLMLCLYRRDCRRPFTP------ 623
            |..|:                   ||...:...:.|....|.|.| .:...|||:|..|      
Zfish   370 LDTDHNEEDDDEPIPESSELTLQELLGEERRNKKGPRVDPLETEM-GIRASDCRKPLIPFEEFIN 433

  Fly   624 -PKHWLIPEVKPSTFINDLEKAKRNAM----LLLAKMPHI-IPHEDRVKLFRKFVQNEKAVMGLT 682
             |.:.::...|..||.....::|.:.|    :|.|...:: :.:::|::::.:  :...|:..|.
Zfish   434 EPLNEVLEMDKDYTFFKVETESKFSFMTCPFILNAVTKNLGLYYDNRIRMYSE--RRITALYSLV 496

  Fly   683 ESACASPRSALIVIHRDRIVEDG---YRQLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKE 744
            :....:|...| .:.||.|::|.   ...:|.:....||..:.|.|..:|     |:|:.||.||
Zfish   497 QGQQLNPYLRL-KVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQ-----GVDEGGVSKE 555

  Fly   745 FLEETIKKVFDPSLNLFKTTSDQRLY-PSPISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFAS 808
            |.:..::::|:|.:.:|......:|: .:|.|:..:..   |..:|.:||.|:|...::||.|..
Zfish   556 FFQLVVEEIFNPDIGMFTYDESTKLFWFNPSSFENEGQ---FTLIGIVLGLAIYNNCILDVHFPM 617

  Fly   809 FFLSQLLGQTQQALYSCMDELPSLDNELYRSLTFIKHYKQDV-SDLNLTFSVDQ-DVMGKIVTLA 871
            ....:|:|:.     ....:|......|::||..:..|:.:| .|:.:||.:.| |:.|..:...
Zfish   618 VIYRKLMGKK-----GTFRDLADSHPVLFQSLKDLMEYEGNVEEDMMITFQISQTDLFGNPLMYD 677

  Fly   872 L-HPGGKARVVNDHNK---LVYIHYMAFFHMNTQIREQTIAFNRGFRSIVNPEWLS-LFSPPELQ 931
            | ..|.|..|.|::.|   .:|..||    :|..:.:|..||.|||..:.|...|. ||.|.|::
Zfish   678 LKESGDKIPVTNENRKDFVALYAEYM----LNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIE 738

  Fly   932 RLISGDTSPLDLKDLQKHTHYYGGFHDTHQVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLG 996
            .||.|..: ||.:.|::.|.|.||::...:::...|:.: ..|.:|:::|||:|.|...:.|:.|
Zfish   739 LLICGSRN-LDFQALEESTEYDGGYNKDSRIIRDFWETV-HSFEQEKKRLFLQFTTGTDRAPVGG 801

  Fly   997 FAHLEPPFSIRCVEVSDDEDTGDTIGSVIRGFFAIRKKDP-LNRLPTSSTCFNLLKLPNYQKKST 1060
            ...|:                           ..|.|..| .:|||||.||||:|.||.|.....
Zfish   802 LGKLK---------------------------MIIAKNGPDSDRLPTSHTCFNVLLLPEYSTVEK 839

  Fly  1061 LRDKLRYAVSSNTGF 1075
            |:::|..|::...||
Zfish   840 LKERLLKAITYAKGF 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 HECTc 694..1076 CDD:238033 110/394 (28%)
HECTc 718..1075 CDD:214523 102/365 (28%)
ube3aNP_001007319.1 AZUL 6..60 CDD:293166
HECTc 505..855 CDD:238033 111/397 (28%)
HECTc 532..854 CDD:214523 103/367 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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