DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and trip12

DIOPT Version :9

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:XP_005159283.1 Gene:trip12 / 564866 ZFINID:ZDB-GENE-041111-262 Length:2096 Species:Danio rerio


Alignment Length:623 Identity:135/623 - (21%)
Similarity:234/623 - (37%) Gaps:180/623 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 ILDEHEMYTEQNPFKLNDYVLLTYFLNNI------LY------------KLINDNLLAGAKNIVQ 598
            |.|..|..|..:|..  :.:||...|::|      ||            :.||..|.|.|...:|
Zfish  1558 ICDPPEGITFDDPSM--EVILLLRVLHSISRYWFYLYDNAACKEIIPTGEFINSKLTAKANRQLQ 1620

  Fly   599 HPVFLSLHTLMLCLYRRDCRRPFTPPKHWLIPEVKPSTFINDLEKAKRNAMLLLAKMPHIIPHED 663
            .|:.:....                     ||     |::.:|.|.          .|...|.:.
Zfish  1621 DPLVIMTGN---------------------IP-----TWLTELGKT----------CPFFFPFDT 1649

  Fly   664 RVKLF------------RKFVQNEKAVMGLTESACASPR--SALIVIHRDRIVEDGYRQLAAQPT 714
            |..||            |....|.:.....::.:..:||  .....|:||.:::..  :...|..
Zfish  1650 RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQA--ESVMQDL 1712

  Fly   715 QALKGVIRVRFINQQGLHEAGIDQDGVFKEFL-----------------------------EETI 750
            .:.:.::.:::.|:.|   .|:   |..:||.                             :|..
Zfish  1713 GSSRAMLEIQYENEVG---TGL---GPTQEFYALVSQELQRADLGLWRGEEVTLSNPKVGSQEGT 1771

  Fly   751 KKVFDPSLNLFKTTSDQRLYPSPISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFASFFLSQLL 815
            |.:|. |..||.....:...|:.|:.::..    |.|:|:::.||:.:..::|:|....|...:|
Zfish  1772 KYMFS-SRGLFAVPFGRTTKPAHIAKIKMK----FRFLGKLMAKAIMDFRLLDLPLGLPFYKWML 1831

  Fly   816 GQTQQALYSCMDELPSLDNELYRSLTFI-------KHYKQD---------------------VSD 852
             :.:.::.|  .:|.::|..:.:|:..:       |..:||                     |.|
Zfish  1832 -RHESSISS--HDLVNIDPGVAKSIQHLEDIIRQKKRIEQDRSHTRETLQQALESLNMNGCSVED 1893

  Fly   853 LNLTFSVDQDVMGKIVTLALHPGGKARVVNDHNKLVYIHYMAFFHMNTQIREQTIAFNRGFRSIV 917
            |.|.|:     :.....:.|..|||...|..||...|:..:.::.:|..:..|..:|..||.|:.
Zfish  1894 LGLDFT-----LPGFPNIELKKGGKDVPVTIHNLEDYLRLVVYWTLNEGVLRQFESFREGFESVF 1953

  Fly   918 NPEWLSLFSPPELQRLISGDTS-PLDLKDLQKHTHYYGGFHDTHQVVCWLWDILAKDFTEEERKL 981
            ....|..|.|.||.:|:.|..| ..|:|.|.:......|:....:.|.:|:::|: .|..|:::|
Zfish  1954 PLHHLQYFYPEELDQLLCGSKSESWDVKTLMECCRPDHGYTHDSRAVRFLFEVLS-SFDAEQQRL 2017

  Fly   982 FLKFVTSCSKPPLLGFAHLEPPFSIRCVEVSDDEDTGDTIGSVIRGFFAIRK-----KDPLNRLP 1041
            ||:|||...:.|:.||..|.||.:|                        :||     ::|.:.||
Zfish  2018 FLQFVTGSPRLPVGGFRSLNPPLTI------------------------VRKTFESTENPDDFLP 2058

  Fly  1042 TSSTCFNLLKLPNYQKKSTLRDKLRYAV-SSNTGFELS 1078
            :..||.|.||||:|.....:|:||..|. .....|.||
Zfish  2059 SVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS 2096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 HECTc 694..1076 CDD:238033 100/445 (22%)
HECTc 718..1075 CDD:214523 96/420 (23%)
trip12XP_005159283.1 WWE 842..907 CDD:280915
HECTc 1693..2094 CDD:238033 100/446 (22%)
HECTc 1711..2090 CDD:214523 96/422 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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