DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and hyd

DIOPT Version :10

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster


Alignment Length:1244 Identity:222/1244 - (17%)
Similarity:391/1244 - (31%) Gaps:417/1244 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 ELVASNVYPVLRRYLTQIRLDKSDVRA-----RERLERICRYIIKAMESENTKLSYAALCLFKER 130
            ||::...|.||....|.:::...:..|     .:||:....::...|:....:|.:.|       
  Fly  1821 ELISILSYNVLNDIETSLKIQNDEAIAVQAFVEKRLKATWDWMFTVMDGTEAQLKFGA------- 1878

  Fly   131 SLPWIAHIKILLTNCLTLLPELKPENHADSLSLALFLHTLVVFTAPKSWAILRNAQFEKLQ---P 192
                      .|||       ....||.        ||.|.:           :||....|   |
  Fly  1879 ----------YLTN-------YTDPNHP--------LHPLNL-----------SAQASSSQTPAP 1907

  Fly   193 AMQKIC--CNIQGHLVQHDFYKIMRLVLIRGTVREELSVKPVTLVAIITLCLRPLIDGNFSRNLL 255
            |.....  .||.|...:.||:... |.|:|....|.....||..:..:                 
  Fly  1908 ATSSSVNGVNIMGSNSRRDFFTYC-LSLMRSHTSEHRDALPVLDITAL----------------- 1954

  Fly   256 AKFLSEILSVPALIYHLQQSVPQCLEQFSSMGLLKKALSISG----------------DVQWFEE 304
             :.::.:|.  |.:|:::          :..|...|..:|||                ::...||
  Fly  1955 -RHIAYVLD--AFVYYMR----------NDSGFYDKQDTISGRINNLSPMTESYDTDDELANLEE 2006

  Fly   305 F-------GTSMP----GTKSLAFLGNIVNLFNI-----DGQGESKELAYPL-----LTETTTSL 348
            |       .:|||    ||:..||.....:..::     :|.....::|.||     |.:..:..
  Fly  2007 FNADVQMSASSMPSGSQGTRRHAFFARSESTLSLGCSAPEGFELPLDMAMPLADKPHLLQPNSKR 2071

  Fly   349 LEL---IPNTVTTK-------------GVFTQWHELLGWH------------------------- 372
            .||   :|..|||.             .:|......||:.                         
  Fly  2072 QELFANLPLLVTTNANNSGATNDGDGGSIFDYTPTRLGFSNSLKRNERVYETVPIDSSKTGDGNV 2136

  Fly   373 TPGPEPAQNQN--VALIKKQ------FHMLWD------HRCIKLLLGDLLKQINLNYERIEFQSP 423
            |...|.:.:.|  |.|.|||      .|...|      .:.:.:...|.|...:.:.|.:....|
  Fly  2137 TNKAEGSTDSNIYVQLKKKQGSDDFKSHKEADGNQSKYEKVVLMETDDSLPSTSKSTEALMATRP 2201

  Fly   424 Q---QPSISNLLRRALER---------------SSTRGVNLMGVASSKQSK--QQWRKLDSAEVV 468
            :   .|:.:::......|               |.....:...:::::|:|  .|::|..|..::
  Fly  2202 EVIIAPNKASVSPATAARSVIVLAGGSCLKTIDSDINNYSASNLSTAEQAKCDTQYQKSTSDHLL 2266

  Fly   469 QVSRICGMYYAALNT--------LSQMKLDI-LTGICYSDNVLYDIWLLITSLGPNC-------- 516
            ........:|.:..:        ||:.||.: |.|..:.|    |:.:...|:.|..        
  Fly  2267 LFPARGSQFYQSNFSELPSWNFLLSRWKLTLDLFGRVFMD----DVGMEHGSVLPELRGFPVKEM 2327

  Fly   517 -----------GMKEYLELLKSETNLQKPQTAMLMLFCDCMTHYVTILDEHEMYTEQNPFKLNDY 570
                       |.:..|.|.|.|.|   .::.::..|.:..|.:     .::....|.|...| .
  Fly  2328 RFRRHMEKLRNGQQRDLVLCKLERN---RESLIVQTFKELNTQF-----GNQSRRIQPPITFN-R 2383

  Fly   571 VLLTY--------FLNNILYKLINDNLLAGAK--NI------VQHPVFLSLHTLML--------- 610
            |.:|:        .:....|..|.:.|||.||  |:      ..|..::...:.:|         
  Fly  2384 VKVTFKDEPGEGSGVARSFYTSIAEALLASAKIPNLESVQVGTNHSKYVVPFSSILRSRTVSGSS 2448

  Fly   611 ----CLYRRDCR------------------RPFTPPK----------------------HWLIPE 631
                .|.||...                  ||:|||.                      ..|.|:
  Fly  2449 RDQSTLQRRGSNSKILWRSARERKALNLDARPYTPPNSSDNATPESLNDHLSVHLQQIGERLYPK 2513

  Fly   632 VKPSTFINDLEKAKRNAMLLLAKMPHIIPHEDRVKLFRKFVQNEKAVMGLTESACASPRSALIVI 696
            :..   ||.....|...|||....|.::......:..|:.|.....::...:.:..|.:|     
  Fly  2514 IHS---INQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEIITFKQKSETSAQS----- 2570

  Fly   697 HRDRIVEDGYRQLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKEFLEETIKKVFDPSLNLF 761
                          :||.::...|:                            :..|.|.:..||
  Fly  2571 --------------SQPKKSPSVVV----------------------------VDPVDDDNEPLF 2593

  Fly   762 KTTSDQRLYPSPISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFASFFLSQLLGQTQQALYSCM 826
            .:...:..|.....:.....:..|..:||::|..:.:..::.:......|..:||:..:     .
  Fly  2594 YSPGKRGFYTPRQGFASFERINAFRNIGRLIGLCLLQNELLPLFLQRHVLKYILGRKIK-----F 2653

  Fly   827 DELPSLDNELYRSLTFI------KHYKQDVSDLNLTFSVD---QDVMGKIVTLALHPGGKARVVN 882
            .:|...|..||.|...|      |..::.::.:.|.|.:|   ::..|   ...|.|||:...|.
  Fly  2654 HDLAFFDPALYESFRQIIQNAQTKEGEETINRMELCFVIDLMKEEGCG---NRELIPGGRDVAVT 2715

  Fly   883 DHNKLVYIHYMAFFHMNTQIREQTIAFNRGFRSIVNPEWLSLFSPPELQRLISGDTSPLDLKDLQ 947
            ..|...|:.....:.:.....:...|...|...::....:...:..:|:.|::| ...:::..|.
  Fly  2716 SSNIFEYVRRYTEYRLIKSQEKALEALKDGVFDVLPDNSMINLTAEDLRLLLNG-VGDINVSTLI 2779

  Fly   948 KHTHYYGGFHDTH--------QVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLL--GFAHLEP 1002
            .:|    .|:|..        :...|.|.|:.| ....||:..:.|.|.....|..  ||..| |
  Fly  2780 SYT----TFNDESSEGPDKLLKFKKWFWSIVEK-MNIMERQDLVYFWTGSPALPASEEGFQPL-P 2838

  Fly  1003 PFSIRCVEVSDDEDTGDTIGSVIRGFFAIRKKDPLNRLPTSSTCFNLLKLPNYQKKSTLRDKLRY 1067
            ..:||   .:||                       :.|||::||.:.|.:|.|..||.||.|:..
  Fly  2839 SVTIR---PADD-----------------------SHLPTANTCISRLYIPLYSSKSILRSKMLM 2877

  Fly  1068 AV-SSNTGF 1075
            |: |.|.||
  Fly  2878 AIKSKNFGF 2886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 IQCD 20..50 CDD:467745
HECTc 694..1076 CDD:238033 77/402 (19%)
hydNP_001287262.1 UBA_like_SF 150..196 CDD:473871
UBR-box_UBR5 1211..1286 CDD:439073
MDN1 <1551..>1724 CDD:444083
PolyA 2498..2561 CDD:197769 11/65 (17%)
HECTc 2589..2884 CDD:214523 69/335 (21%)
Blue background indicates that the domain is not in the aligned region.

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