DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and Ube3c

DIOPT Version :9

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:XP_038964472.1 Gene:Ube3c / 362294 RGDID:1559986 Length:1083 Species:Rattus norvegicus


Alignment Length:1222 Identity:319/1222 - (26%)
Similarity:531/1222 - (43%) Gaps:307/1222 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QNQKASFLEQTKAAREERALEKRREQAAILLQSTLKGYAARRKYQKRIILDFDAMFTENHDDKDA 68
            :.:|||.|.:|:..|.:|..|:||.:.|:::||.::||..|::          ..||:.     :
  Rat    22 KEEKASLLHRTQEERRKREEERRRLKNAVIIQSFIRGYRDRKQ----------QYFTQR-----S 71

  Fly    69 ELELVASNVYP--------------VLRRYLTQIRLDKSDVRARERLERICRY---IIKAMESEN 116
            ..:..|.:..|              ::|:.|...:..:...|.....:.:.::   .:|.::.  
  Rat    72 AFDQCADSAQPGGTFRIADGPALTLLVRQLLFFYKQSEDSKRLIWLYQNLIKHSSLFVKQLDG-- 134

  Fly   117 TKLSYAALCLFKERSLPWIAHIKILLTNCLTLLPELKPENHADSLSLALFLHTLVVFTAPKSW-A 180
               |....|||:         :|.|::.|..||.....    |||::||.:..|.||::..:: .
  Rat   135 ---SERLTCLFQ---------LKRLMSLCCRLLQNCSD----DSLNVALPMRMLEVFSSENTYLP 183

  Fly   181 ILRNAQFEKLQPAMQKICCNIQGHLVQHDFYKIMRLVLIRGTVREELSVKPVTLV----AIITLC 241
            :|:::.:      :..:...|..::|...:|:.:.| ||...:...:....::.|    .::...
  Rat   184 VLQDSSY------VVSVIEQILHYMVHSGYYRSLYL-LINSKLPSSIEYSDLSRVPMAKTLLENV 241

  Fly   242 LRPLIDGNFS---------RNLLAKFLSEILSVPAL--IYHL--------QQSVPQCLEQFSSMG 287
            |:||   :|:         ..:.:.|..|.|..|..  |||.        |...|  .|.|.:..
  Rat   242 LKPL---HFTYSSCPEGARHQVFSAFTEEFLGAPFTDQIYHFIIPALADTQTVFP--YEPFLNAL 301

  Fly   288 LLKKALSI--SGDVQWFEEFGTSMPGTKSLAFLGNIVNLFNIDGQGESKELAYPLLTETTTSLLE 350
            ||.::.|.  |..|.|...|        .|....|.:...:.||.     |.|..:.:|..|.|.
  Rat   302 LLLESRSSKRSSGVPWLFYF--------VLTIGENYLGALSEDGL-----LVYLRVLQTFLSQLP 353

  Fly   351 LIPNTVTTKGVFTQWHELLGWHTPGPEPAQNQNVALIKKQFHMLWDHRCIKLLLGDLLKQINLNY 415
            ..|..|..                 |:|..:..                            :.|.
  Rat   354 ASPTGVGR-----------------PDPTSDSE----------------------------DDNE 373

  Fly   416 ERIEFQSPQQPSIS------NLLRRALERSSTRG-VNLMGVASSKQSKQQWRKLDSAEV-VQVSR 472
            |..:..||:...:|      ..||:...:..|.. :||:           ||...|.|| .:::.
  Rat   374 ETDQPTSPEDGRVSAPYITEECLRKLDTKQQTNTLLNLV-----------WRDSASEEVFTRMAS 427

  Fly   473 ICGMYYAALNTLSQM------KLDILTGICYSDNVLYDIWLLITSLGPNC---GMKEYLELLKSE 528
            ||       :||...      |:.:|..:.::...|..:|.||:|:....   .|...|:::...
  Rat   428 IC-------HTLMVQHRMMVPKVRLLYSLAFNARFLRHLWFLISSMTTQMITGSMVPLLQVISRG 485

  Fly   529 TNLQKPQTAMLM----LFCDCMTHYVTILDEHEMYTE-----------QNPFKLNDYVLLTYFLN 578
            :.:....::.::    ||....:|.:..:.::|.:.:           ..||.|.:.:||:..|.
  Rat   486 SPMSFEDSSRIIPLFYLFSSLFSHSLISIHDNEFFGDPIEVVGQRQLSMMPFTLEELILLSRCLR 550

  Fly   579 NI---LYKL--------INDNLLAGAKNI-------VQH----------PVFLSLHTLMLCLYRR 615
            :.   :.||        :.:..::..::|       :||          .:|..:..|:..|..|
  Rat   551 DACLGIIKLAYPETKPEVREEYVSAFQSIGVTTNSEMQHCIQMEQKRWVQLFKVITNLVKMLKSR 615

  Fly   616 DCRRPFTPPKHWL---------------IP------------EVKP--STFINDLEK-----AKR 646
            |.||.|.||.|||               :|            .:.|  ||....||.     ::.
  Rat   616 DTRRNFCPPNHWLSEQEDIKADKVTQLYVPASRHVWRFRRMGRIGPLQSTLEVGLESPPLSVSEE 680

  Fly   647 NAMLLLAKMPHIIPHEDRVKLFRKFVQNEKAVM--------GLTESACASPRSALIVIHRDRIVE 703
            ..:.:|.::|.::|.|:|||:|::.:..:|..:        |:.           :.|.|:.|.|
  Rat   681 RQLAILTELPFVVPFEERVKIFQRLIYADKQEVQGDGPFLDGIN-----------VTIRRNYIYE 734

  Fly   704 DGYRQLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKEFLEETIKKVFDPSLNLFKTTSDQR 768
            |.|.:|:.:....||..|||..:|..||.|||||..|:|:|||.|.:|..|:|:...||||::..
  Rat   735 DAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFKTTNEGL 799

  Fly   769 LYPSPIS--YVQDNHLELFEFVGRMLGKAVYEGIVVDVPFASFFLSQLLGQTQQALYSCMDELPS 831
            |||:|.:  .|.|:....:.|:|||||||:||.::|::|||.||||:|||.:...   .:..|.|
  Rat   800 LYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADV---DIHHLAS 861

  Fly   832 LDNELYRSLTFIKHYKQDVSDLNLTFSVDQDVMGKIVTLALHPGGKARVVNDHNKLVYIHYMAFF 896
            ||.|:|::|.|:|.|::||.:|.|.|:|..:.:|:...:.|..|||...|...|::.|||.:|.:
  Rat   862 LDPEVYKNLLFLKSYEEDVEELGLNFTVVNNDLGEAQVVELKFGGKDIPVTGANRIAYIHLVADY 926

  Fly   897 HMNTQIREQTIAFNRGFRSIVNPEWLSLFSPPELQRLISGDTSPLDLKDLQKHTHYYGGFHDTHQ 961
            .:|.|||...:||.:|..::|:.|||.:|...|:|.||||...|:.|:||:..|:|.||:...|.
  Rat   927 RLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPVSLEDLKSFTNYSGGYSADHP 991

  Fly   962 VVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLGFAHLEPPFSIRCVEVSDDEDTGDTIGSVIR 1026
            |:...|.:: :.||:||::..||||||||:||||||..|.|.|   |:.....:           
  Rat   992 VIKIFWRVV-EGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAF---CIHNGGSD----------- 1041

  Fly  1027 GFFAIRKKDPLNRLPTSSTCFNLLKLPNYQKKSTLRDKLRYAVSSNTGFELS 1078
                      |.||||:|||.||||||.:..::.||.||.||:....|||||
  Rat  1042 ----------LERLPTASTCMNLLKLPEFYDEALLRSKLLYAIECAAGFELS 1083

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 HECTc 694..1076 CDD:238033 159/383 (42%)
HECTc 718..1075 CDD:214523 150/358 (42%)
Ube3cXP_038964472.1 IQ 47..64 CDD:197470 6/16 (38%)
HECTc 725..1081 CDD:238033 159/383 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1163565at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100865
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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