DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and Ube3a

DIOPT Version :9

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_001178766.1 Gene:Ube3a / 361585 RGDID:1306361 Length:868 Species:Rattus norvegicus


Alignment Length:726 Identity:176/726 - (24%)
Similarity:313/726 - (43%) Gaps:140/726 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 ALERSSTRGVNLMGVASSKQSKQQWRKLDSAEV-VQVSRICGMYYAALNTLSQMKLDILTGICY- 497
            |:|..|....:.||  .|.|.....:||...:| |.:..|..:|.:.|:. .:::...|..:.| 
  Rat   195 AMEEDSEASSSRMG--DSSQGDNNVQKLGPDDVTVDIDAIRRVYSSLLSD-EKIETAFLNALVYL 256

  Fly   498 SDNVLYDI-WLLITSLGPNCGMKEYLEL---LKSETNLQKPQ--TAMLMLFCDCMTHYVTILDEH 556
            |.||..|: :..:.:..||     ||.|   :....||..|:  ...|.|||..|:. :.:..:.
  Rat   257 SPNVECDLTYHNVYTRDPN-----YLNLFIIVMENRNLHSPEYLEMALPLFCKAMSK-LPLAAQG 315

  Fly   557 EMYTEQNPFKLNDYV--LLTYFLNNILYK----------LINDN--LLAGAK--------NIV-- 597
            ::....:.:.. |.:  ::..|...|.||          |:||:  ::|.:|        |:|  
  Rat   316 KLIRLWSKYSA-DQIRRMMETFQQLITYKVISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGG 379

  Fly   598 -----------QHPV----FLSLHTLM------------------LCLYRRDCRRP-------FT 622
                       :.|:    .|:|..|:                  :.:...|||:|       ..
  Rat   380 DVDTNHNEEDDEEPIPESSELTLQELLGEERRNKKGPRVDPLETEIGVKTLDCRKPLISFEEFIN 444

  Fly   623 PPKHWLIPEVKPSTFINDLEKAKRNAM----LLLAKMPHI-IPHEDRVKLFRKFVQNEKAVMGLT 682
            .|.:.::...|..||.....:.|.:.|    :|.|...:: :.:::|::::.:  :....:..|.
  Rat   445 EPLNDVLEMDKDYTFFKVETENKFSFMTCPFILNAVTKNLGLYYDNRIRMYSE--RRITVLYSLV 507

  Fly   683 ESACASPRSALIVIHRDRIVEDG---YRQLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKE 744
            :....:|...| .:.||.|::|.   ...:|.:....||..:.|.|..:|     |:|:.||.||
  Rat   508 QGQQLNPYLRL-KVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQ-----GVDEGGVSKE 566

  Fly   745 FLEETIKKVFDPSLNLFKTTSDQRLY-PSPISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFAS 808
            |.:..::::|:|.:.:|......||: .:|.|:..:..   |..:|.:||.|:|...::||.|..
  Rat   567 FFQLVVEEIFNPDIGMFTYDEATRLFWFNPSSFETEGQ---FTLIGIVLGLAIYNNCILDVHFPM 628

  Fly   809 FFLSQLLGQTQQALYSCMDELPSLDNELYRSLTFIKHYKQDV-SDLNLTFSVDQ-DVMGKIVTLA 871
            ....:|:|: :.......|..|.    ||:||..:..|:.:| .|:.:||.:.| |:.|..:...
  Rat   629 VVYRKLMGK-KGTFCDLGDSHPI----LYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYD 688

  Fly   872 LHPGGKARVVNDHNKLVYIHYMAFFHMNTQIREQTIAFNRGFRSIVNPEWLS-LFSPPELQRLIS 935
            |...|....:.:.|:..::...:.:.:|..:.:|..||.|||..:.|...|. ||.|.|::.||.
  Rat   689 LKENGDKIPITNENRKEFVSLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLIC 753

  Fly   936 GDTSPLDLKDLQKHTHYYGGFHDTHQVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLGFAHL 1000
            |..: ||.:.|::.|.|.||:.....|:...|:|: ..||:|:::|||:|.|...:.|:.|...|
  Rat   754 GSRN-LDFQALEETTEYDGGYTRESVVIREFWEIV-HSFTDEQKRLFLQFTTGTDRAPVGGLGKL 816

  Fly  1001 EPPFSIRCVEVSDDEDTGDTIGSVIRGFFAIRKKDP-LNRLPTSSTCFNLLKLPNYQKKSTLRDK 1064
            :                           ..|.|..| ..|||||.||||:|.||.|..|..|:::
  Rat   817 K---------------------------MIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKER 854

  Fly  1065 LRYAVSSNTGF 1075
            |..|::...||
  Rat   855 LLKAITYAKGF 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 HECTc 694..1076 CDD:238033 111/390 (28%)
HECTc 718..1075 CDD:214523 103/361 (29%)
Ube3aNP_001178766.1 AZUL 27..81 CDD:406862
HECTc 516..866 CDD:238033 112/393 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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