DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and Hectd3

DIOPT Version :10

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_001386141.1 Gene:Hectd3 / 313525 RGDID:1309823 Length:861 Species:Rattus norvegicus


Alignment Length:786 Identity:161/786 - (20%)
Similarity:299/786 - (38%) Gaps:198/786 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 QWHELLGW---HTPG--PEPAQNQNVALIKKQFHM--LWDHRCIKLLLGDLLKQINLNYERIEFQ 421
            :|.:::..   |..|  |:||:....| :::..::  .|.:.|.:    ||   |:..|:.:..:
  Rat   177 RWEQVVDLTYSHRLGSRPQPAEAYTEA-VQRLLYVPPTWTYECDE----DL---IHFLYDHLGKE 233

  Fly   422 SPQQPSISNLLRRALERSSTRGVNLMGVASSKQSK---------QQWRKLDSAEVVQVSRIC--- 474
            .....|:...:......|.|...|:..:..|....         |.|.:|...:...|.::.   
  Rat   234 DENLGSVKQYVESIDVSSYTEEFNVSCLTDSNADTYWESDGSQCQHWVRLTMKKGTIVKKLLLTV 298

  Fly   475 -----------GMYYAA----LNTLSQMKLD--ILTGICYSDNVLYDIWLLITSLGPNC---GMK 519
                       .:.|..    |..||.:.:|  ::..:|..:::...:.::...: ..|   |:.
  Rat   299 DTTDDNFMPKRVVVYGGEGDNLKKLSDVNIDETLIGDVCVLEDMTVHLPVIEIRI-VECRDDGID 362

  Fly   520 EYLELLKSETNLQKPQTAMLMLFCDC-MTHYVTI--LDEHEMYTEQNPFKLNDYVLLTYF---LN 578
            ..|..:|.:::.|:.......||... :..|..:  .|...:|...        |||..|   |:
  Rat   363 VRLRGVKIKSSRQRELGLNADLFQPASLVRYPRLEGTDPEVLYRRA--------VLLQRFIKILD 419

  Fly   579 NILYKLIN--DNLLAGAKNIVQHPVFLSLHTLMLCLYRRDCRRPFTPPKHWLIPEVKPSTF---I 638
            ::|:.|:.  |:.|.....|.|...||                        |:...:||..   :
  Rat   420 SVLHHLVPAWDHTLGTFSEIKQVKQFL------------------------LLSRQRPSLVTQCL 460

  Fly   639 NDLEKAKRNAMLLLAKMPHIIPHEDRVKLFRKFVQNEKAVMGLTESACASPRSALIVIHRDRIVE 703
            .|.|.:|          |..:|   |:.:.|:        :.:...||.|...|.    ::.:..
  Rat   461 RDSESSK----------PSFMP---RLYINRR--------LAMEHRACPSRDPAC----KNAVFT 500

  Fly   704 DGYRQLAAQPTQALKGVIRVRFINQ-------QGLHEAGIDQDGVFKEFLEETIKKVFDPS---- 757
            ..|..|  :|:...:..:..|:..:       :.:.|..|||.|.|::.|.:..:::...|    
  Rat   501 QVYEGL--KPSDKYEKPLDYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTP 563

  Fly   758 --LNLFKTTSDQ--------RLY-PSPISYVQDNHLELFEFVGRMLGKAV--YEGIVVDVPFASF 809
              |..|..|::|        .:| |:|    .......:|::|:::|.|:  .|.:|:.:|  .|
  Rat   564 VPLPFFVRTANQGNGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALP--GF 622

  Fly   810 FLSQLLGQTQQALYSCMDELPSLDNELYRSLTFIKHYKQDVSDL----NLTFSV---DQDVMGKI 867
            ...||.|:.    .|...:.|::|:.|.:.|..::...::..:.    .|||:.   ||.|    
  Rat   623 VWKQLSGEE----VSWSKDFPAVDSVLVKLLEVMEGVDKETFEFKFGKELTFTTVLSDQQV---- 679

  Fly   868 VTLALHPGGKARVVNDHNKLVYIHYMAFFHMNTQIREQTIAFNRGFRSIVNPEWLSLFSPPELQR 932
              :.|.|||...||...::|.:|..:....:. :.:||..|...|...:|....|.|.:..||::
  Rat   680 --VELIPGGTGIVVGYEDRLRFIQLVQKARLE-ESKEQVAAMQAGLLKVVPQAVLDLLTWQELEK 741

  Fly   933 LISGDTSPLDLKDLQKHTHYYGGFHDTHQVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLGF 997
            .:.||.. :.:..|:|.|. :..|..:...|.:.|:.| .:||.|:|..||:|||..|:.|  ..
  Rat   742 KVCGDPE-VTVDALRKLTR-FEDFEPSDTRVQYFWEAL-NNFTNEDRSRFLRFVTGRSRLP--AR 801

  Fly   998 AHLEPPFSIRCVEVSDDEDTGDTIGSVIRGFFAIRKKDPLNRLPTSSTCFNLLKLPNYQKKSTLR 1062
            .::.|                |.:|           .:..:.||.||||.:.|.||:|.......
  Rat   802 IYIYP----------------DKLG-----------YETTDALPESSTCSSTLFLPHYASAKVCE 839

  Fly  1063 DKLRYA 1068
            :|||||
  Rat   840 EKLRYA 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 IQCD 20..50 CDD:467745
HECTc 694..1076 CDD:238033 96/406 (24%)
Hectd3NP_001386141.1 APC10-HECTD3 238..371 CDD:176487 19/133 (14%)
HECT 579..845 CDD:459880 78/314 (25%)
Blue background indicates that the domain is not in the aligned region.

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