DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and Itch

DIOPT Version :10

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_001005887.2 Gene:Itch / 311567 RGDID:1359556 Length:864 Species:Rattus norvegicus


Alignment Length:441 Identity:126/441 - (28%)
Similarity:205/441 - (46%) Gaps:53/441 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   655 MPHIIPHEDRVKLF---------------RKFVQNEKAVMGLTESAC---ASPRSALIVIHRDRI 701
            :|:.:.|..|...:               ..:|::.||.:......|   |.|:...|.:.|..:
  Rat   454 IPYFVDHNRRATTYIDPRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTL 518

  Fly   702 VEDGYRQLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKEFLEETIKKVFDPSLNLFKTTSD 766
            .||.::|:.:...|.|:..:.|.|..::||     |..||.:|:......:|.:|...||:....
  Rat   519 FEDSFQQIMSFSPQDLRRRLWVIFPGEEGL-----DYGGVAREWFFLLSHEVLNPMYCLFEYAGK 578

  Fly   767 QR--LYPSPISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFASFFLSQLLGQTQQALYSCMDEL 829
            ..  |..:|.||:..:||:.|.|:||.:..|::.|..:|..|:..|..::|.:...     :.:|
  Rat   579 DNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVG-----LKDL 638

  Fly   830 PSLDNELYRSLTFIKHYKQDVSDLNLTFSVDQDVMGKIVTLALHPGGKARVVNDHNKLVYIHYMA 894
            .|:|.|.|.||.::|....:...|.:.||||::::|:|.:..|.|.|...:|.:.||..||..:|
  Rat   639 ESIDPEFYNSLIWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVA 703

  Fly   895 FFHMNTQIREQTIAFNRGFRSIVNPEWLSLFSPPELQRLISGDTSPLDLKDLQKHTHYYGGFHDT 959
            .:.::..:.|||.||..||..|:..::|..|...||:.|:.| ...:||.|.|:|. .|..:..|
  Rat   704 EWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCG-MQEIDLNDWQRHA-IYRHYTRT 766

  Fly   960 HQVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLGFAHLEPPFSIRCVEVSDDEDTGDTIGSV 1024
            .:.:.|.|..: |:...|:|...|:|||...:.|:.|||                    |.:||.
  Rat   767 SKQIVWFWQFV-KEIDNEKRMRLLQFVTGTCRLPVGGFA--------------------DLMGSN 810

  Fly  1025 IRGFFAIRKKDPLNRLPTSSTCFNLLKLPNYQKKSTLRDKLRYAVSSNTGF 1075
            ....|.|.|....|.||.|.||||.|.||.|:....|::||.:|:....||
  Rat   811 GPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGF 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 IQCD 20..50 CDD:467745
HECTc 694..1076 CDD:238033 117/384 (30%)
ItchNP_001005887.2 C2_E3_ubiquitin_ligase 17..140 CDD:175988
WW 289..318 CDD:459800
HUL4 <320..864 CDD:227354 126/441 (29%)
Blue background indicates that the domain is not in the aligned region.

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