DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5087 and Hectd2

DIOPT Version :10

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:XP_038936565.1 Gene:Hectd2 / 309514 RGDID:1305536 Length:813 Species:Rattus norvegicus


Alignment Length:902 Identity:201/902 - (22%)
Similarity:327/902 - (36%) Gaps:253/902 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 GTSMPGTKSLAFLGNIVNLFNID-----GQGESKELAYPLLTETTTSLLELIPNTVTT------- 358
            |:|:|||...|  ||..:....|     |||.      |:.:|        :|.:..|       
  Rat    34 GSSLPGTGGPA--GNGRSRGRRDPEEFKGQGP------PVGSE--------VPGSSATTGEGKAR 82

  Fly   359 ------KGVFTQWHELLGWHTPGPEPAQNQ----NVAL---------------IKKQFHMLWDHR 398
                  ||..:.:...:...|...|.|:|:    ::||               ::::..|..|..
  Rat    83 GLDRGSKGQISTFSSFVSSVTQKKEAAENRSSPTHLALPNIRNVRDLPPICLDVRQKQRMSMDSL 147

  Fly   399 CIKLLLGDLLKQINLNYERIEFQSPQQPSISNLLRRALERSSTRG---------------VNLMG 448
            ..::.:..|.:.|          .|.||.........||::...|               ...:.
  Rat   148 SSEVKVPPLPEPI----------LPSQPKTVKDFEEDLEKAEATGNWKTVHAFYITAFDSFTELN 202

  Fly   449 VASSKQSKQQWRKLDSAEVVQVSRICGMYYAALNTLSQMKLDILTGICYSDNVLYDIWLLITSLG 513
            .|..|.:...:..::.:. :..:.:..::.|.|||...::..:|.||.   |.|...|     .|
  Rat   203 AAFKKDATASFNTIEDSG-INANLVNAVFDALLNTPQDIQKSVLKGII---NSLLQEW-----KG 258

  Fly   514 PNC--GMKEYLELLKSETNLQKPQ---TAMLMLFCDCMTHYVTILDEHEMYTEQNPFKLNDYVLL 573
            |..  .::.|..|      ||.||   |:..:::...:....|:::.             |:..|
  Rat   259 PRTKDDLRAYFIL------LQNPQFNITSTYVIYAHLLRQIATLVEA-------------DHHFL 304

  Fly   574 TYFLNNILYKLINDNLLAGAKNIVQHPV-FLSLHTLMLCLYRRDCRRPFTPPKH-------WLIP 630
            .::|..:..|..        |.:|:..: |:||...           |..|.:.       |.||
  Rat   305 VHWLKKLSQKKF--------KQLVERLLQFVSLRLF-----------PAKPEEFPPLTKCTWWIP 350

  Fly   631 EVKPSTFINDLEKAKRNAMLLLAK---MPHIIPHE-------DRVKLFRKF-------------- 671
            ..           ||..|:|..|.   .|.::|:.       |.:.|..::              
  Rat   351 SA-----------AKVLALLNTANNLVHPPLVPYTDFYNSTLDHIDLMEEYHTWQSFGNSHSRFS 404

  Fly   672 ----------------VQNEK-------AVMGLTESACASPRSAL------IVIHRDRIVEDGYR 707
                            :|.:.       |...|.:......|..:      :.:.|..:|.|...
  Rat   405 FCQYPFVISITAKKIIIQRDSEQQMISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLD 469

  Fly   708 QLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKEFLEETIKKVFDPSLNLFKTTSDQRLYPS 772
            :|..:... ||..::|.|:.     |||:|..|:.||:....|:::|.|...:|....|...:..
  Rat   470 ELTRKRAD-LKKKLKVTFVG-----EAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWF 528

  Fly   773 PISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFASFFLSQLLG--------QTQQALYS-CMDE 828
            . |:..||:.| |..||.::|.|||..|.:|:.|......:||.        .|...:.| .:|:
  Rat   529 S-SFKCDNYSE-FRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDD 591

  Fly   829 LPSLDNELYRSLTFIKHYKQDV-SDLNLTFSVDQDVMGKIVTLALHPGGKARVVNDHNKLVYIHY 892
            |..:..||...|..:..|:.:| .|...||.|.|:..|.|.:..|.|||....|.:.|:..|:..
  Rat   592 LCQIMPELAHGLKELLSYEGNVEEDFYSTFQVFQEEFGVIKSYNLKPGGDKIPVTNQNRREYVQL 656

  Fly   893 MAFFHMNTQIREQTIAFNRGFRSIVNPEWLSLFSPPELQRLISGDTSP-LDLKDLQKHTHYYGGF 956
            ...|.:|..|.:|..||..||.|:.....|.|..|.|::.|:.|  || ||:..||:.|. |.|:
  Rat   657 YTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCG--SPELDMHALQRSTQ-YDGY 718

  Fly   957 HDTHQVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLGFAHLEPPFSIRCVEVSDDEDTGDTI 1021
            ..|...:.:.||::. .|..|.:|..|.|.|...:.|:.|.|.|.                    
  Rat   719 AKTDLTIRYFWDVVL-GFPLELQKKLLHFTTGSDRVPVGGMADLN-------------------- 762

  Fly  1022 GSVIRGFFAIRKKD-PLNRLPTSSTCFNLLKLPNYQKKSTLRDKLRYAVSSNTGFEL 1077
                   |.|.|.: ..|.||.:.||||.|.||.|:.|..|:.||...:|::.||.|
  Rat   763 -------FKISKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGL 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 IQCD 20..50 CDD:467745
HECTc 694..1076 CDD:238033 116/393 (30%)
Hectd2XP_038936565.1 HECTc 454..811 CDD:238033 116/395 (29%)
Blue background indicates that the domain is not in the aligned region.

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