DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5087 and Wwp1

DIOPT Version :9

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:XP_006237992.1 Gene:Wwp1 / 297930 RGDID:1311734 Length:968 Species:Rattus norvegicus


Alignment Length:457 Identity:131/457 - (28%)
Similarity:207/457 - (45%) Gaps:55/457 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   625 KHWLIPEVKPSTFINDLEKAKRNAMLLLAKMPHIIPHED--RVKL--FRKFVQNEKAVMGLTESA 685
            ::::....:.:||     |..||....:.|....|.:|.  |.||  ||...|:.          
  Rat   558 RYFVDHNTRTTTF-----KDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSN---------- 607

  Fly   686 CASPRSALIVIHRDRIVEDGYRQLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKEFLEETI 750
             |.|....|.:.|..:.||.::|:.|.....|:..:.|.|..::||     |..|:.:|:.....
  Rat   608 -ALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGL-----DYGGLAREWFFLLS 666

  Fly   751 KKVFDPSLNLFKTTSDQR--LYPSPISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFASFFLSQ 813
            .:|.:|...||:......  |..:|.|.:..:||..|.|:||.:..|::.|..:|..|:..|..:
  Rat   667 HEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKR 731

  Fly   814 LLGQTQQALYSCMDELPSLDNELYRSLTFIKHYKQDVSDLNLTFSVDQDVMGKIVTLALHPGGKA 878
            :|.:.     ..:.:|.|:|.|.|.||.:|:....:...|.:.||||.:::||:.:..|..||..
  Rat   732 MLSKK-----LTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSN 791

  Fly   879 RVVNDHNKLVYIHYMAFFHMNTQIREQTIAFNRGFRSIVNPEWLSLFSPPELQRLISGDTSPLDL 943
            .:|.:.||..||..|..:..:..::|||.||..||..:|..:||..|...||:.::.| ...:||
  Rat   792 ILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCG-MQEVDL 855

  Fly   944 KDLQKHTHYYGGFHDTHQVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLGFAHLEPPFSIRC 1008
            .|.|::|.|.....::.|:: |.|..: |:...|.|...|:|||...:.||.|||.|        
  Rat   856 ADWQRNTVYRHYTRNSKQII-WFWQFV-KETDNEVRMRLLQFVTGTCRLPLGGFAEL-------- 910

  Fly  1009 VEVSDDEDTGDTIGSVIRGFFAIRKKDPLNRLPTSSTCFNLLKLPNYQKKSTLRDKLRYAVSSNT 1073
                        :||.....|.|.|......||.|.||||.|.||.|:....|::||.:|:....
  Rat   911 ------------MGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 963

  Fly  1074 GF 1075
            ||
  Rat   964 GF 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 HECTc 694..1076 CDD:238033 115/384 (30%)
HECTc 718..1075 CDD:214523 106/358 (30%)
Wwp1XP_006237992.1 C2_E3_ubiquitin_ligase 67..190 CDD:175988
PARM 243..>400 CDD:293666
WW 397..426 CDD:278809
WW 429..458 CDD:278809
WW 504..533 CDD:278809
WW 545..574 CDD:238122 3/20 (15%)
HECTc 614..966 CDD:238033 115/385 (30%)
HECTc 637..965 CDD:214523 107/360 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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