DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5087 and Wwc1

DIOPT Version :9

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_740749.1 Gene:Wwc1 / 211652 MGIID:2388637 Length:1104 Species:Mus musculus


Alignment Length:704 Identity:134/704 - (19%)
Similarity:217/704 - (30%) Gaps:272/704 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 KQFHMLWDHRC---IKLLLG---------DLLK--------QIN-LNYERIEFQSPQQPSISNLL 432
            :|.|.:|:|:.   :.|:.|         ::||        ::| |..|.:..|...|       
Mouse   129 QQLHAVWEHKLGSQVSLVSGSSSSSKYDPEILKAEIATAKSRVNKLKREMVHLQHELQ------- 186

  Fly   433 RRALERSSTRGVNLMGVASSKQSKQQ-WRKLDSAEVVQVSRICGMYYAALNTLSQMKLDILTGIC 496
                  ...||...:.....:.|..| ..|||.|:            |.|.....:|..|     
Mouse   187 ------FKERGFQTLKKIDERMSDAQGGYKLDEAQ------------AVLRETKAIKKAI----- 228

  Fly   497 YSDNVLYDIWLLITSLGPNCGMKEYLELLKSETNLQKPQTAMLMLFCDCMTHYVTILDEH-EMYT 560
                              .||.||..:|:||        .|||      ...:.|....| ::::
Mouse   229 ------------------TCGEKEKQDLIKS--------LAML------KDGFRTDRGSHSDLWS 261

  Fly   561 EQNPFKLNDYVLLTYFLNNILYKLINDNLLAGAKNIVQHPVFLSLHTLMLCLYRRDCRRPFTPPK 625
            ..:..:.:.:.:...||:......|:.:....:.|.:...|.|.|.                   
Mouse   262 SSSSLESSSFPMPKQFLDVSSQTDISGSFSTSSNNQLAEKVRLRLR------------------- 307

  Fly   626 HWLIPEVKPSTFINDLEKAKR---NAMLLLAKM-----PHIIPHE-DRVKLFRKFVQNEKAVMGL 681
                           .|:|||   |..:.|||:     |.::..| ||:.|.     |||..: |
Mouse   308 ---------------YEEAKRRIANLKIQLAKLDSEAWPGVLDSERDRLILI-----NEKEEL-L 351

  Fly   682 TESACASPRS------ALIVIHRDRIVEDGYRQLAAQPTQ--ALKGVIRVRFINQQGLHEAGIDQ 738
            .|....|||.      ..:.:.|.|:.:|   ..||:.||  ||...:::.....|.:.|     
Mouse   352 KEMRFISPRKWTQGEVEQLEMARRRLEKD---LQAARDTQSKALTERLKLNSKRNQLVRE----- 408

  Fly   739 DGVFKEFLEETIKKVFDPSLNLFKTTSDQRLYPSPISYVQDNHLELFEFVGRMLGKAVYEGIVVD 803
                   |||..::|......|...:|..:...|                               
Mouse   409 -------LEEATRQVATLHSQLKSLSSSMQSLSS------------------------------- 435

  Fly   804 VPFASFFLSQLLGQTQQALYSCMDEL--PSLDNELYRSLT--FIKHYKQDVSDLNLTFSVDQDVM 864
                        |.:..:|.|....|  .|||:....|.|  :...::|          :|.::.
Mouse   436 ------------GSSPGSLTSSRGSLAASSLDSSTSASFTDLYYDPFEQ----------LDSELQ 478

  Fly   865 GKIVTLAL------HPGG-----------KARVVNDHNKLVYIHYMAFFHMNTQIREQTIAFNRG 912
            .|:..|.|      .|.|           |.:.....::|     .|...::...|..|....|.
Mouse   479 SKVELLFLEGATGFRPSGCITTIHEDEVAKTQKAEGGSRL-----QALRSLSGTPRSMTSLSPRS 538

  Fly   913 FRSIVNPEWLSLFSPPELQRLISGDT--SPLDLKDLQKHTHYYGGFHDTHQVVCWLWDILAKDFT 975
            ..|..:|....|.:.|    |::||.  :||:.:|.:..|           .:|.|  .|....|
Mouse   539 SLSSPSPPCSPLITDP----LLTGDAFLAPLEFEDTELST-----------TLCEL--NLGGSGT 586

  Fly   976 EEERKLFLKFVTSCSKP-----PLLGFAHLEP--PFSIRCVE--VSDDEDTGDT 1020
            :|..:|        .:|     ||...|.:.|  ...:.||.  |||:...||:
Mouse   587 QERYRL--------EEPGPEGKPLGQAASVAPGCGLKVACVSAAVSDESVAGDS 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 HECTc 694..1076 CDD:238033 69/361 (19%)
HECTc 718..1075 CDD:214523 60/335 (18%)
Wwc1NP_740749.1 WW 9..39 CDD:238122
WW 55..84 CDD:278809
ALDH-SF 378..>420 CDD:299846 13/56 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..449 4/62 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 509..547 7/42 (17%)
C2_Kibra 661..784 CDD:176062
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..949
Interaction with histone H3. /evidence=ECO:0000250 836..1104
Interaction with PRKCZ. /evidence=ECO:0000250 945..988
ADDV motif 1102..1104
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.