DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5087 and Ube3b

DIOPT Version :10

Sequence 1:NP_648279.1 Gene:CG5087 / 39035 FlyBaseID:FBgn0035953 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_473434.2 Gene:Ube3b / 117146 MGIID:1891295 Length:1070 Species:Mus musculus


Alignment Length:1100 Identity:523/1100 - (47%)
Similarity:709/1100 - (64%) Gaps:52/1100 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF--AQNQKASFLEQTKAAREERALEKRREQAAILLQSTLKGYAARRKYQKRIILDFDAMFTENH 63
            ||  :|..:|.|:::.:.|||||.::|.||::|:.:|:.::.:..||:..:.|..:.|..|:.  
Mouse     1 MFTVSQTSRAWFIDRARQAREERLVQKERERSAVTIQALVRSFLCRRRLHRDIRKEIDEFFSA-- 63

  Fly    64 DDKDAELELVASNVYPVLRRYLTQIRLDKSDVRARERLERICRYIIKAMESEN-TKLSYAALCLF 127
             |:....:..|..::.:.||.|...:..:..    ||||::||.|:.:|::|| .|:.|.:|.|.
Mouse    64 -DESGSSKRSALCIFKIARRLLFICKTTEDS----ERLEKLCRSILNSMDAENEPKVWYVSLALS 123

  Fly   128 KERSLPWIAHIKILLTNCLTLLPELKPENHADSLSLALFLHTLVVFTAPKSWAILRNAQFEKLQP 192
            |:.:|.||..||.:|.:|..||.:||||...||..:.|:|..||.||...:|.||| .:.|.|:|
Mouse   124 KDLTLLWIKQIKSILWHCCELLGQLKPEILQDSRLITLYLTMLVTFTDTSTWKILR-GKGESLRP 187

  Fly   193 AMQKICCNIQGHLVQHDFYKIMRLVLIRGTVREELSVKPVTLVAIITLCLRPLIDGNFSRNLLAK 257
            |:..||.||.|||.|...|.:::::|.||..|....:....|.|..:|.|||::...||.||:..
Mouse   188 ALNHICANIMGHLNQRGLYSVLQVLLTRGLARPRPCLSKGMLTAAFSLALRPVVAAQFSDNLMRP 252

  Fly   258 FLSEILSVPALIYHLQQSVPQCLEQFSSMGLLKKALSISGDVQWFEEFGTSMPGTKSLAFLGNIV 322
            |:..::|||||:.||....|:.|....|..:|:|.:....|.....:...|:.|..:|..:||::
Mouse   253 FIIHVMSVPALVAHLSTVAPERLGVLESHDMLRKFIVFLRDRDRCRDACESLEGCHTLCLMGNLL 317

  Fly   323 NLFNIDGQGESKELAYPLLTETTTSLLELIPN--------TVTTKGVFTQWHELLGWHTPGPEPA 379
            :|         ..|:..||.|.....:..:..        ....|...|.||.:|||.:...:..
Mouse   318 HL---------GSLSLRLLEEEMDGFVSALTQMLCYCQKYVAQKKSNLTHWHPVLGWFSQPVDYG 373

  Fly   380 QNQNVALIKKQFHMLWDHRCIKLLLGDLLKQINLNYERIEFQSPQQPS---------ISNLLRRA 435
            .|.::.||.||...||....|::|..|:|.:..|.:..   .:|.||.         :.:||:||
Mouse   374 LNDSMYLITKQLQFLWAVPLIRILFSDILSRKLLEHAE---PAPVQPQPSSPQTVLPVKSLLKRA 435

  Fly   436 LERS-STRGVNLMGVASSKQSKQQWRKLDSAEVVQVSRICGMYYAALNTLSQMKLDILTGICYSD 499
            .::| |.|.: |..|..        |::|||||.:|..||.:|..:|.||:|::|.||||:.|.|
Mouse   436 FQKSASVRNI-LRPVGG--------RRVDSAEVRKVCNICVLYQTSLTTLTQIRLQILTGLTYLD 491

  Fly   500 NVLYDIWLLITSLGPNCGMKEYLELLKSETNLQKPQTAMLMLFCDCMTHYVTILDEHEMYTEQNP 564
            ::|..:|..|..|||:.|:|.:||.|.::|...|...|||||||||..|.:||||:.|:|.||..
Mouse   492 DLLPKLWAFICELGPHGGLKLFLECLNNDTGESKQLLAMLMLFCDCSRHLITILDDIEVYEEQIS 556

  Fly   565 FKLNDYVLLTYFLNNILYKLINDNLLAGAKNIVQHPVFLSLHTLMLCLYRRDCRRPFTPPKHWLI 629
            |||.:.|.::.|||:.::|:|.|.::..||..... :|.|:|..::.||.|||||.|.|..|||.
Mouse   557 FKLEELVTISSFLNSFVFKMIWDGIVENAKGETLE-LFQSVHGWLMVLYERDCRRRFAPEDHWLR 620

  Fly   630 PEVKPSTFINDLEKAKRNAMLLLAKMPHIIPHEDRVKLFRKFVQNEKAVMGLTESACASPRSALI 694
            .::||.....:|:|.:|.|.|:|..:||::||::||.|||..|..||..:||.|::.|||....|
Mouse   621 RDLKPGVLFQELDKDRRRAQLVLQHIPHVVPHKNRVLLFRNMVIKEKEKLGLVETSSASPHVTHI 685

  Fly   695 VIHRDRIVEDGYRQLAAQPTQALKGVIRVRFINQQGLHEAGIDQDGVFKEFLEETIKKVFDPSLN 759
            .|.|.|::||||.||......|:||||||:|:|..|:.||||||||||||||||.||:||||:||
Mouse   686 TIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALN 750

  Fly   760 LFKTTS-DQRLYPSPISYVQDNHLELFEFVGRMLGKAVYEGIVVDVPFASFFLSQLLGQTQQALY 823
            |||||| |:||||||.||:.:|:|:||||||:|||||||||||||||||||||||:||......|
Mouse   751 LFKTTSGDERLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQMLGHHHSVFY 815

  Fly   824 SCMDELPSLDNELYRSLTFIKHYKQDVSDLNLTFSVDQDVMGKIVTLALHPGGKARVVNDHNKLV 888
            |.:|||||||:|.|::||.||.|..|::||.||.|.|:||||::|...|.||||...|.|.||:.
Mouse   816 SSVDELPSLDSEFYKNLTSIKRYDGDIADLGLTLSYDEDVMGQLVCHELVPGGKTIPVTDENKIS 880

  Fly   889 YIHYMAFFHMNTQIREQTIAFNRGFRSIVNPEWLSLFSPPELQRLISGDTSPLDLKDLQKHTHYY 953
            |||.||.|.|:|||:.||.|...|||||:.|||:.:||.||||||||||.:.:||:||:|||.||
Mouse   881 YIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYY 945

  Fly   954 GGFHDTHQVVCWLWDILAKDFTEEERKLFLKFVTSCSKPPLLGFAHLEPPFSIRCVEVSDDEDTG 1018
            ||||.:|:|:.|||||||.|||.|||.:|||||||||:|||||||:|:|||||||||||||:|||
Mouse   946 GGFHGSHRVIIWLWDILASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTG 1010

  Fly  1019 DTIGSVIRGFFAIRKKDPLNRLPTSSTCFNLLKLPNYQKKSTLRDKLRYAVSSNTGFELS 1078
            ||:|||:||||.|||::|..|||||||||||||||||.|||.||:|||||:|.|||||||
Mouse  1011 DTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTGFELS 1070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5087NP_648279.1 IQCD 20..50 CDD:467745 9/29 (31%)
HECTc 694..1076 CDD:238033 267/382 (70%)
Ube3bNP_473434.2 HECTc 684..1068 CDD:238033 267/383 (70%)

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