DRSC/TRiP Functional Genomics Resources

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Protein Alignment smg and ZCCHC2

DIOPT Version :9

Sequence 1:NP_001137924.1 Gene:smg / 39034 FlyBaseID:FBgn0016070 Length:1109 Species:Drosophila melanogaster
Sequence 2:NP_060212.4 Gene:ZCCHC2 / 54877 HGNCID:22916 Length:1178 Species:Homo sapiens


Alignment Length:768 Identity:143/768 - (18%)
Similarity:230/768 - (29%) Gaps:296/768 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   533 SNSSVITVNDNCSNSTENLAQFANK-PRSFSLSIEHQRGAL--MNSGSDTRLDEFKPNYIKFHTR 594
            |:.||.||    :.:.:.|.:|..| |:..| |....:..|  :|.||..|.:...|: ::...|
Human   380 SDLSVTTV----TKTHQELQEFLLKLPKELS-SETFDKTILRALNQGSLKREERRHPD-LEPILR 438

  Fly   595 NVGMSGIGLWLKSLRLHKYIELFKNMTYEEMLLITEDFLQSVGVTKGASHKLALCIDKLKERANI 659
            .:..|....:|:|.::|.:.:           .|:.|.|.|:...: :|.|.:..::.|||.::.
Human   439 QLFSSSSQAFLQSQKVHSFFQ-----------SISSDSLHSINNLQ-SSLKTSKILEHLKEDSSE 491

  Fly   660 LNRVEQELLSGQM--ELSTAVEELTNIVLTPMKPLESPGPPEENIGLRFLKVIDIV------TNT 716
            .:..|:::|...:  :..|....:.|.:.|...||       :.:.:::.:...||      ..|
Human   492 ASSQEEDVLQHAIIHKKHTGKSPIVNNIGTSCSPL-------DGLTMQYSEQNGIVDWRKQSCTT 549

  Fly   717 LQQDPYAV-------------------------------QDDETLGVLMWILDRSIHNEAFMNHA 750
            :|...:.|                               :.|..|...:..:..|....|   |.
Human   550 IQHPEHCVTSADQHSAEKRSLSSINKKKGKPQTEKEKIKKTDNRLNSRINGIRLSTPQHA---HG 611

  Fly   751 SQLKDLKFKL----------SKMKISMVPKMHH-------------------------------- 773
            ..:||:...:          |....|......|                                
Human   612 GTVKDVNLDIGSGHDTCGETSSESYSSPSSPRHDGRESFESEEEKDRDTDSNSEDSGNPSTTRFT 676

  Fly   774 ----------VKP----AGVGPNNGN-----INKPRWNG----KTRKCDTKNGSN---------- 805
                      |||    |.:|..|||     :|.|::..    .|..|...||:.          
Human   677 GYGSVNQTVTVKPPVQIASLGNENGNLLEDPLNSPKYQHISFMPTLHCVMHNGAQKSEVVVPAPK 741

  Fly   806 -----------------DRINNRKNSNDM---------------LNFSLNCLPHP---LPHHSQQ 835
                             ..|....||..:               |....:.||.|   |||.|..
Human   742 PADGKTIGMLVPSPVAISAIRESANSTPVGILGPTACTGESEKHLELLASPLPIPSTFLPHSSTP 806

  Fly   836 A----------PPPLPQFDYNGYGGG-------PSHQPQYKSSSYPSF----MGNPQQQPPPP-- 877
            |          |||        .|..       |...|...|.:.|:.    :.||...|..|  
Human   807 ALHLTVQRLKLPPP--------QGSSESCTVNIPQQPPGSLSIASPNTAFIPIHNPGSFPGSPVA 863

  Fly   878 ---PSSKSHHHPQQMQQMLQQ-HNHFPALPQQTPPQSHRRSLNNLILVAGG--PQQPQQLIFKPG 936
               |.:||......:.||:.| ..:...:||.|..:        ::|.|.|  ..||......||
Human   864 TTDPITKSASQVVGLNQMVPQIEGNTGTVPQPTNVK--------VVLPAAGLSAAQPPASYPLPG 920

  Fly   937 Q----GVLTNNGSNDNLVLERNQQSQQQQQQRKLSGGVSSAEQQPKKTMAAVVMVSNP------- 990
            .    |||.:..|:   ||.....|.|     ..|.|:|.|:    .|:...|....|       
Human   921 SPLAAGVLPSQNSS---VLSTAATSPQ-----PASAGISQAQ----ATVPPAVPTHTPGPAPSPS 973

  Fly   991 ---NQNQDQHDQPQILINNNNNNSMLNNNLINQQQLQLLAAAAAAVGSGSC-----LCSNGGGG- 1046
               ..:..|.|....:....|.|:  |..::..||:          |||.|     .||.|..| 
Human   974 PALTHSTAQSDSTSYISAVGNTNA--NGTVVPPQQM----------GSGPCGSCGRRCSCGTNGN 1026

  Fly  1047 ---------------------------ACVHNICHQSSKNNNHGVDHCLSQSP 1072
                                       .|..:..:|:.::|.:.:...|.|:|
Human  1027 LQLNSYYYPNPMPGPMYRVPSFFTLPSICNGSYLNQAHQSNGNQLPFFLPQTP 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smgNP_001137924.1 SAM_Smaug 597..655 CDD:188956 11/57 (19%)
SAM 601..656 CDD:197735 11/54 (20%)
PHAT 656..763 CDD:204178 20/155 (13%)
ZCCHC2NP_060212.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..249
PX_domain 363..461 CDD:295365 22/97 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 557..683 11/128 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 936..986 12/58 (21%)
zf-CCHC 1133..1148 CDD:278525
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3791
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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