DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5068 and ppme1

DIOPT Version :10

Sequence 1:NP_648277.3 Gene:CG5068 / 39032 FlyBaseID:FBgn0035951 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_002942566.1 Gene:ppme1 / 100495664 XenbaseID:XB-GENE-979838 Length:388 Species:Xenopus tropicalis


Alignment Length:415 Identity:203/415 - (48%)
Similarity:281/415 - (67%) Gaps:33/415 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLQRTMLKGKLP--PTIPGG-RIGRADSFKKSRIRDYKPGMWNEFFAEKEDVTVDEQR---TF 59
            ||:|::.:..|:||  ||:||| :.|........|.||:.|..|:::|...|||.|:.:.   :|
 Frog     1 MSALEKQLQLGRLPPRPTMPGGLQSGSKMRMGPGRRRDFSPVPWSQYFESMEDVVVESETGKDSF 65

  Fly    60 RIYRTKQPEKPGPVLLLLHGGGYSALTWAHFCSEVTSMIHCQCLCIDMRGHGDSKVDDEDDLSAD 124
            |:||:   ...|||||||||||:|||:||.|.:.:||.|.|:.:.:|.||||::||.:.:||||:
 Frog    66 RVYRS---GSEGPVLLLLHGGGHSALSWAVFTTAITSRIRCRVVALDQRGHGETKVKNPEDLSAE 127

  Fly   125 TLAKDIGDLILKLYPEEVPQLFVVGHSMGGAIAVHFAHMALVPNLIGITVIDVVEGTAMEALASM 189
            |:|:|||:::..||.:..|.:.::|||||||||||.|...|||:|:|:.||||||||||:||.||
 Frog   128 TMARDIGNVVEALYGDLPPPIMLIGHSMGGAIAVHTAAANLVPSLLGLCVIDVVEGTAMDALNSM 192

  Fly   190 QSFLRSRPKYFQSIPNAIEWCIRSGQVRNVDSAKVSMPGQIINCTTNKLATNDLPLPDDVLEEAH 254
            |:|||||||.|:|:.|||||.::|||:||::||:|||.|||..|...........:.:.::||..
 Frog   193 QNFLRSRPKTFKSLENAIEWSVKSGQIRNLESARVSMAGQIKQCEEASTPEGPKAIVEGIIEEEE 257

  Fly   255 HNSMFPNPFSISEDEESSPPGDDAADGSSESAAAGADFKKPNTTKSTTEAAKNYTWRIDLSKSEK 319
            .          .||||.:       .|.|.:..     ||.:.|:  |:..:.|||||:|||:||
 Frog   258 E----------EEDEEEN-------GGQSINKR-----KKEDDTE--TKKERPYTWRIELSKTEK 298

  Fly   320 YWVGWFSGLSDKFLNLRLPKQLLLASIDGLDRTLTVGQMQGRFQMQVLARCGHAVHEDRPHEVAE 384
            ||.|||.|||:.||:..:|||||||.:|.||:.||:|||||:||||||.:||||||||.|.:|||
 Frog   299 YWEGWFRGLSNLFLSCPIPKQLLLAGVDRLDKDLTIGQMQGKFQMQVLPQCGHAVHEDAPDKVAE 363

  Fly   385 VISGYLIRNRFAEAASEFRCHMPSC 409
            .::.:|:|:||||:...|.|..|:|
 Frog   364 AVATFLVRHRFAESVGGFHCVFPAC 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5068NP_648277.3 MenH 46..262 CDD:440361 110/218 (50%)
ppme1XP_002942566.1 MenH 65..372 CDD:440361 172/333 (52%)

Return to query results.
Submit another query.