DRSC/TRiP Functional Genomics Resources

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Protein Alignment pix and RLI1

DIOPT Version :10

Sequence 1:NP_648272.1 Gene:pix / 39027 FlyBaseID:FBgn0086706 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_010376.3 Gene:RLI1 / 851665 SGDID:S000002498 Length:608 Species:Saccharomyces cerevisiae


Alignment Length:604 Identity:410/604 - (67%)
Similarity:499/604 - (82%) Gaps:8/604 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DKQTRIAIVSDDKCKPKRCRQECKKTCPVVRMGKLCIEVTPTSKIASLSEELCIGCGICVKKCPF 75
            ||.:||||||.||||||:||||||::||||:.||||||||||||||.:||.||||||||||||||
Yeast     3 DKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPF 67

  Fly    76 EAITIINLPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 140
            :||.|||||:|||.|.|||||.|||||||||.||||:||||||.|||||||||||||||||||||
Yeast    68 DAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLG 132

  Fly   141 KYANPPDWTEILSYFRGSELQNYFTKILEDNLKALVKPQYVDQIPKAVRG---AVGDLLDKKDER 202
            ::.:||:|.||:.|||||||||||||:|||::||::||||||.||:|::|   .||:||..:.|:
Yeast   133 RFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAIKGPVQKVGELLKLRMEK 197

  Fly   203 --ELQTKICEMLDLSHIRDREIAQLSGGELQRFAIAMVCIQNADIFMFDEPSSYLDVKQRLNAAL 265
              |...:..::|.|.::..|:|.:|||||||||||.|.|:|.||::||||||||||||||||||.
Yeast   198 SPEDVKRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQ 262

  Fly   266 TIRSLLHPTKFIIVVEHDLSVLDYLSDFICCLYGVPGCYGVVTMPFSVREGINIFLDGFVPTENM 330
            .|||||.|||::|.||||||||||||||:|.:||||..|||||:|.||||||||||||.:|.||:
Yeast   263 IIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSVYGVVTLPASVREGINIFLDGHIPAENL 327

  Fly   331 RFRTESLTFKVSESATE--EEIKRMNHYVYPAMVKTLGKFELTVEKGHFSDSEILVLLGENGTGK 393
            |||||:|.|:::: |||  :.......:.||::.||.|.|.|.||:|.||||||||::|||||||
Yeast   328 RFRTEALQFRIAD-ATEDLQNDSASRAFSYPSLKKTQGDFVLNVEEGEFSDSEILVMMGENGTGK 391

  Fly   394 TTFIRMLAGNLQPDGEVELPMLNISYKPQKISPKFQNHVRHLLHDKIRDAYVHPQFIADVMKPMK 458
            ||.|::|||.|:||...::|.||:|.|||||:|||...||.|...|||..:::|||..||:||::
Yeast   392 TTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLR 456

  Fly   459 IEEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRYILHAKKTG 523
            |::|:|||||:||||||||||:||.||.|||:|||||||||||||||::.:|||:|:|||.|||.
Yeast   457 IDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTA 521

  Fly   524 FVVEHDFIMATYLADRVIVIEGQPSVKTTAFSPQSLLNGMNRFLELLGITFRRDPNNFRPRINKN 588
            |:|||||||||||||:|||.||.||....|.:|:|||.|.||||:.|.:|||||||:|||||||.
Yeast   522 FIVEHDFIMATYLADKVIVFEGIPSKNAHARAPESLLTGCNRFLKNLNVTFRRDPNSFRPRINKL 586

  Fly   589 NSVKDTEQKRSGQFFFLED 607
            :|..|.|||.||.:|||::
Yeast   587 DSQMDKEQKSSGNYFFLDN 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pixNP_648272.1 Rli1 14..606 CDD:440858 407/598 (68%)
RLI1NP_010376.3 Rli1 7..604 CDD:440858 407/597 (68%)

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