DRSC/TRiP Functional Genomics Resources

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Protein Alignment pix and abce-1

DIOPT Version :9

Sequence 1:NP_648272.1 Gene:pix / 39027 FlyBaseID:FBgn0086706 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_499717.1 Gene:abce-1 / 176733 WormBaseID:WBGene00012714 Length:610 Species:Caenorhabditis elegans


Alignment Length:611 Identity:413/611 - (67%)
Similarity:489/611 - (80%) Gaps:6/611 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRRK---ENEEVDKQTRIAIVSDDKCKPKRCRQECKKTCPVVRMGKLCIEVTPTSKIASLSEEL 62
            |||:.   :|.|.|...|||||..|:||||.|...||:.|||.|.||.||.|..||.|:.:||.|
 Worm     1 MSRKGPLIKNNETDVPLRIAIVEKDRCKPKNCGLACKRACPVNRQGKQCIVVEATSTISQISEIL 65

  Fly    63 CIGCGICVKKCPFEAITIINLPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTA 127
            ||||||||||||::||.|||||:||...||||||:|||||||||.||.||||||||.||||||||
 Worm    66 CIGCGICVKKCPYDAIKIINLPANLANETTHRYSQNSFKLHRLPTPRCGEVLGLVGTNGIGKSTA 130

  Fly   128 LKILAGKQKPNLGKYANPPDWTEILSYFRGSELQNYFTKILEDNLKALVKPQYVDQIPKAVRGAV 192
            |||||||||||||.:....:||.|:::|||||||||||:||||.||.::|||||||||:|.:|.|
 Worm   131 LKILAGKQKPNLGNFQKEQEWTTIINHFRGSELQNYFTRILEDTLKCVIKPQYVDQIPRAAKGTV 195

  Fly   193 GDLLDKKDERELQTKICEMLDLSHIRDREIAQLSGGELQRFAIAMVCIQNADIFMFDEPSSYLDV 257
            ...|.:|.:.:....:.:.::|..:.||||.||||||||||||||.|:|.||::|||||||||||
 Worm   196 EKNLTRKHDNDNLNSVIDQMELRGLLDREIDQLSGGELQRFAIAMCCVQKADVYMFDEPSSYLDV 260

  Fly   258 KQRLNAALTIRSLLHPTKFIIVVEHDLSVLDYLSDFICCLYGVPGCYGVVTMPFSVREGINIFLD 322
            ||||.||..||..:..|.:::||||||:|||||||||||||||||.|||||:|..||||||:||:
 Worm   261 KQRLKAAAIIRERVSDTNYVVVVEHDLAVLDYLSDFICCLYGVPGVYGVVTLPSGVREGINMFLE 325

  Fly   323 GFVPTENMRFRTESLTFKVSESATEEEIKRMNHYVYPAMVKTLGKFELTVEKGHFSDSEILVLLG 387
            ||:.|||||||...|:||.||.  :|:|||..:..||:|.||||.|.|.||.|.||||||:|:||
 Worm   326 GFIRTENMRFRESKLSFKTSEQ--QEDIKRTGNIKYPSMSKTLGNFHLDVEAGDFSDSEIIVMLG 388

  Fly   388 ENGTGKTTFIRMLAGNLQPDGE-VELPMLNISYKPQKISPKFQNHVRHLLHDKIRDAYVHPQFIA 451
            ||||||||.|:|:||:|:|:.| .|||.::|||||||||||.:..||.:|||||::.|.||||..
 Worm   389 ENGTGKTTMIKMMAGSLKPEDENTELPHVSISYKPQKISPKSETTVRFMLHDKIQNMYEHPQFKT 453

  Fly   452 DVMKPMKIEEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRYI 516
            |||.|:.:|:::|:.|:.|||||||||||.|||||.|.:||||||||||||||||.|||||||:|
 Worm   454 DVMNPLMMEQLLDRNVKELSGGELQRVALALCLGKTASLYLIDEPSAYLDSEQRLHAAKVIKRFI 518

  Fly   517 LHAKKTGFVVEHDFIMATYLADRVIVIEGQPSVKTTAFSPQSLLNGMNRFLELLGITFRRDPNNF 581
            :|||||.|||||||||||||||||:|.|||||||.||..|||||.||||||::|.||||||...:
 Worm   519 MHAKKTAFVVEHDFIMATYLADRVVVFEGQPSVKCTACKPQSLLEGMNRFLKMLDITFRRDQETY 583

  Fly   582 RPRINKNNSVKDTEQKRSGQFFFLED 607
            ||||||.:||||.:||:|||||||:|
 Worm   584 RPRINKLDSVKDVDQKKSGQFFFLDD 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pixNP_648272.1 Rli1 12..605 CDD:224166 404/593 (68%)
abce-1NP_499717.1 Rli1 16..607 CDD:224166 404/592 (68%)
RLI 17..47 CDD:281988 17/29 (59%)
Fer4 60..82 CDD:278466 16/21 (76%)
ABC_RNaseL_inhibitor_domain1 89..343 CDD:213203 172/253 (68%)
ABC_RNaseL_inhibitor_domain2 357..602 CDD:213204 172/244 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166315
Domainoid 1 1.000 194 1.000 Domainoid score I1861
eggNOG 1 0.900 - - E1_COG1245
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2205
Inparanoid 1 1.050 832 1.000 Inparanoid score I237
Isobase 1 0.950 - 0 Normalized mean entropy S143
OMA 1 1.010 - - QHG62212
OrthoDB 1 1.010 - - D184717at33208
OrthoFinder 1 1.000 - - FOG0004228
OrthoInspector 1 1.000 - - oto20463
orthoMCL 1 0.900 - - OOG6_101314
Panther 1 1.100 - - LDO PTHR19248
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1993
SonicParanoid 1 1.000 - - X165
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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