DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and YMR1

DIOPT Version :10

Sequence 1:NP_648271.3 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_012644.1 Gene:YMR1 / 853574 SGDID:S000003871 Length:688 Species:Saccharomyces cerevisiae


Alignment Length:720 Identity:173/720 - (24%)
Similarity:255/720 - (35%) Gaps:234/720 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEFADLIKTPKLDGVLLHDPSNAGASGATVGTLCITGHHLLLSARQETSQELWLLHKNIDCVEKK 65
            ||:   ||..|:..|:||....     ||.|||.:|.|||:..:.| .|.|.|..:..|..|.|.
Yeast     1 MEY---IKIAKVSNVVLHRRGT-----ATQGTLHLTTHHLIFESPQ-LSTEFWFPYPLIYGVHKN 56

  Fly    66 P------------------------SLSQNIVVGGIITLKC--KDLRIISLEIKCGKEFF----N 100
            |                        .|.|...:...:.:|.  ||..:.||:.  |.:..    .
Yeast    57 PGSTLLSKLTSTNQIQLEGTDSQNYKLYQGKDLWSFVNIKVIGKDYAVFSLDF--GGDLHLQARK 119

  Fly   101 VAASLEALSAIQNTELLYPFFY------RPMYSILEDGYTMFRPELEFAKLISGVGMGGASSPNV 159
            |..|:..|:.:.|...||.|.|      |.:.|  .|.:.::.|..||.:               
Yeast   120 VYDSILNLTVLSNITQLYAFIYISNNLERKLPS--PDSWDIYDPIKEFRR--------------- 167

  Fly   160 ANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGGVGGGALQSPQASCEWRITNVNRDFS 224
                                                       ..|.|...:|.||::.||..:.
Yeast   168 -------------------------------------------QGLDSKDETCPWRLSTVNEHYE 189

  Fly   225 VCATYGATLIVPKAITDEQIVLSAAFRDGGRFPVLSYRHE-NGATLMRSSQPL-------SIQGI 281
            .|.||.:.|.||::.:|..:..::.||...|.|||:|.|: ....::||||||       |||..
Yeast   190 FCPTYPSKLFVPRSTSDILLKHASKFRSQKRIPVLTYHHKATDCNILRSSQPLPGLINQRSIQDE 254

  Fly   282 KR--------CRAD---------------EAILNLVLGRSRKG------FIVD-TWGKGKSNTET 316
            |.        |..|               .|:..:.||...:.      |:.| ..|..||    
Yeast   255 KLVWESFNSFCNKDIRRTKHVIVDARPRTNALAQMALGGGTENMDNYNFFLADNNMGVDKS---- 315

  Fly   317 DLHYSQWKKVNRSIGNVSSPASILDSFARLIEACNDLGCSTDKWLSRLEN-SGWL---SLVLNSL 377
             |......::...|.|:...::.......:|....||....::.|.|.:. |.||   :|:|.|:
Yeast   316 -LKLPTVTRLFLGIDNIHIVSNTAAYMTEVICQGGDLNLPLEQNLIRSQKFSNWLKLNTLILKSV 379

  Fly   378 NASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHPFA 442
            :   ::.:.:....|.||||.:.|.|.|..|.||::|.|:|..||..|...|:|::|...||.|.
Yeast   380 D---MLLKSIIFNHSNVLVHCSDGWDRTSQVVSLLEICLDPFYRTFEGFMILVEKDWCSFGHRFL 441

  Fly   443 SRHRY--------------------------------------------------------SCYT 451
            .|..:                                                        ..:.
Yeast   442 ERSGHLNSDIRFHDNTMHSNFNDVDTNGDDLDIGVNTQDDYAEDDEGGEDETNLINLSRISKKFN 506

  Fly   452 PNQTRNKTS----GATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQYGTFLCDSERER 512
            .|...||.|    ...|..||||:|||.||.|..|||:.:.|..|..|.:..||||||.:||:|:
Yeast   507 ENFKLNKKSLKFVSPVFQQFLDCVYQLLTQNPDLFEFNERFLRRLVYHLYSCQYGTFLSNSEKEK 571

  Fly   513 NELNVHTRTTSLWSYLNRPDVLQTFLNPLY---------------EPNANVIWPSVAPISLELWS 562
            .:.|:..:|.|:|.|..  ...:.|:||.:               |....|.|.|.....::.|.
Yeast   572 FQQNLPNKTKSVWDYFR--SRRKQFINPNFIQRKRSGMNEHDQNLEEEEKVEWISPDLKKVQWWW 634

  Fly   563 DLYLR 567
            .||.|
Yeast   635 QLYGR 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_648271.3 PH-GRAM_MTMR9 1..106 CDD:275398 35/134 (26%)
Myotub-related 210..512 CDD:461958 107/403 (27%)
YMR1NP_012644.1 PH-like 1..>44 CDD:473070 20/51 (39%)
Myotub-related 152..570 CDD:461958 114/485 (24%)

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