DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and mtmr3

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:XP_021333893.1 Gene:mtmr3 / 393838 ZFINID:ZDB-GENE-091204-465 Length:1186 Species:Danio rerio


Alignment Length:649 Identity:172/649 - (26%)
Similarity:273/649 - (42%) Gaps:159/649 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 ETSQELWLLHKNIDCVEKKPSLSQNIVVGGIITLKCKDLRIISLEI----KCGKEFFNVAASLEA 107
            |.|..|.|    |:|||.:.....:|.        |||.:|:..:.    :|.:....:.|::..
Zfish    75 EVSVPLQL----IECVECRDMFQLHIT--------CKDCKIVRCQFSTFEQCQEWLKRLTAAVRP 127

  Fly   108 LSAIQNTELLYPFFYRPMYSILEDGYTMFRPELEFAKLISGVGMGGASSPNVANITICMPSTSTS 172
            .|.|   |.|:.|.:   ::...|.||..:.:                     :..:|.|     
Zfish   128 PSRI---EELFSFAF---HAWCVDLYTGEKEQ---------------------HGDLCRP----- 160

  Fly   173 TLTVGAGIPHPLQNGYAIEALACGVGGVGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPK 237
                |..:.....|  .:|.:        |...|:     .||::.:|..:.:|::|...|:||.
Zfish   161 ----GDHVMSRFHN--EVERM--------GFDTQN-----AWRVSEINNKYKLCSSYPQLLLVPA 206

  Fly   238 AITDEQIVLSAAFRDGGRFPVLSYRHEN-GATLMRSSQP-LS------------IQGIKR-CRAD 287
            .|||:::...||||...|.|.:.|||:: ||.:.|..|| :|            :|.|.| |..|
Zfish   207 WITDKELENVAAFRSWKRIPAVVYRHQSTGAVIARCGQPEVSWWGWRNADDEHLVQSIARACAVD 271

  Fly   288 ----EAILNLVLGRS-----------------------------RKGFIVD---------TWGKG 310
                :.:.|..|.|.                             ||..|:|         ...||
Zfish   272 SSSCKGVSNGSLSREYTNGADLSDVDFESSMTNSSEVETLAIQPRKLLILDARSYAAAVANRAKG 336

  Fly   311 KSNTETDLHYSQWKKVNRSIGNVSSPASILDSFARLIEACNDLGCSTDKWLSRLENSGWLSLVLN 375
             ...|...:|...:.|...:.|:.   ||..||..|...|..:. ....|||.||::.||..:..
Zfish   337 -GGCECPEYYPNCEVVFMGMANIH---SIRKSFQSLRFLCTQMP-DPANWLSALESTKWLQHLSL 396

  Fly   376 SLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHP 440
            .|.||.:|:..:|::..|||||.:.|.|.|..:.:|.:::|:|..||:.|.|.|:|.||:..||.
Zfish   397 LLKASLLVSNAVDRDHRPVLVHCSDGWDRTPQIVALAKLLLDPYYRTIEGFQVLVETEWLDFGHK 461

  Fly   441 FASRHRYSC-YTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQYGTF 504
            ||.|    | :..|..........|:.:|||::||..||||||||:...|:.|.:|::...:|||
Zfish   462 FADR----CGHGENAEDLNERCPVFLQWLDCVHQLQRQFPCSFEFNEAFLVKLVQHTYSCLFGTF 522

  Fly   505 LCDSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEPNANVIWPSVAPI-SLELWSDLYLRW 568
            ||:|.:||.:..:..||.|:||.|...:  ::|.|.||..::..:...|..: :|.||:.:||  
Zfish   523 LCNSGKEREDRRIQERTCSVWSLLRAAN--RSFGNMLYSSHSETVLHPVCHVRNLMLWTAVYL-- 583

  Fly   569 VIDQRSSVTVMS--------------QIQELVTREKELRTQALKLRKQAMELGQEVSNLMKSGN 618
               ..||.|..|              :.|.|..|.|   |::......|.|:|..:::..:|.:
Zfish   584 ---PSSSPTTPSDDSCAPYPAPGANPEDQPLGRRPK---TRSFDNLPSACEVGNPLTSNRRSSD 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 15/62 (24%)
Myotub-related 117..511 CDD:284109 123/451 (27%)
mtmr3XP_021333893.1 PH-like 24..143 CDD:327399 20/85 (24%)
Myotub-related 167..531 CDD:310891 116/387 (30%)
FYVE_MTMR3 1094..1163 CDD:277271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590792
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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