DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5026 and CG3530

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster


Alignment Length:638 Identity:183/638 - (28%)
Similarity:288/638 - (45%) Gaps:125/638 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KLDGVLLHDPSNAGASGATVGTLCITGHHLLLSARQETSQELWLLHKNIDCVEKKPSLSQNIVVG 75
            |::.|.:.|..|  ....|||||.:|..||:. ...::::|.|:||.::..:||.| ||   ..|
  Fly    80 KVENVRMIDRYN--TKNPTVGTLYLTATHLIF-VEPDSNKETWILHMHVASIEKLP-LS---TTG 137

  Fly    76 GIITLKCKDLRIISLEIKCGKEFFNVAASLEALSAIQNTELLYPFFYRPMYSILED-----GYTM 135
            ..:.::||....::..|....|..:|..||..|....:...||.|.|:|.   .:|     |:..
  Fly   138 SPLLIRCKTFLSVTFVIPKDSECHDVYTSLLKLFQP
VSINKLYCFNYQPN---KDDFPKNAGWDY 199

  Fly   136 FRPELEFAKLISGVGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGGV 200
            |:.|.||..::         .||.|                                        
  Fly   200 FKLEAEFKHML---------VPNEA---------------------------------------- 215

  Fly   201 GGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQIVLSAAFRDGGRFPVLSYRHEN 265
                         |.:.::|..:.:|.||...:.|||..|...::.|:.||..||.|||:|.|.|
  Fly   216 -------------WTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLHNN 267

  Fly   266 GATLMRSSQPLSIQGIK-RCRADEAILNLVLGRSRKG-------FIVDT-----------WGKGK 311
            .|::.|.|||||  |.. ||..||.:|..:    ||.       ::|||           .|||.
  Fly   268 KASICRCSQPLS--GFSARCLEDEQMLEAI----RKTNSNTDYMYVVDTRPRINAMANRAAGKGY 326

  Fly   312 SNTETDLHYSQWKKVNRSIGNVSSPASILDSFARLIEACNDLGCSTDKWLSRLENSGWLSLVLNS 376
            .|   :..|...|.....|.|:....:   |..:::|||.....:...:::.||:||||..:.:.
  Fly   327 EN---EAFYENIKFHFLGIENIHVQRA---SLQKVLEACEQKSPTMSAFINALESSGWLKHIRSI 385

  Fly   377 LNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHPF 441
            |:.|..:|..:| :|..|:||.:.|.|.|..|.||.|::|||..||::|.|||||::|:..||.|
  Fly   386 LDTSSFIANAVD-KGVSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKF 449

  Fly   442 ASRHRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQYGTFLC 506
            :.|..:.     ||..:.....|..||||.:||.:|...:|||:.:.|::|.:|.|..|:|||:.
  Fly   450 SERCGHI-----QTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVG 509

  Fly   507 DSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEPNAN-VIWPSVAPISLELWSDLYLRWVI 570
            :.|::|.:|.:..||.|||.|:  .:.|..::||||:||.: .|..::||..::.|..:|.|:  
  Fly   510 NCEKDRLDLKLAERTFSLWGYM--ANHLNEYINPLYKPNVDEAIKANLAPQCIKFWRGMYSRF-- 570

  Fly   571 DQRSSVTVMSQIQELVTREKE----LRTQALKLRKQAMELGQEVSNLMKSGND 619
              .|.:.....:.:::...||    |......|.|:.......:|...|...|
  Fly   571 --ESGIHPREPLGDVLLDSKEHCNSLEDHVQHLTKRIASFKNYISKSAKKLQD 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 28/94 (30%)
Myotub-related 117..511 CDD:284109 123/417 (29%)
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 30/99 (30%)
Myotub-related 179..514 CDD:284109 123/417 (29%)
FYVE_MTMR_unchar 693..753 CDD:277277
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462312
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1089
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192248at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10807
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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